RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 GJB6O95452 261 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 LSM8O95777 96 aaKnown RBP20.76■□□□□ 0.91
SSH1-207ENST00000547862 ALPPL2P10696 532 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 UCHL3P15374 230 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 GKP32189 559 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 ACVRL1P37023 503 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 EIF2S3P41091 472 aaKnown RBP20.76■□□□□ 0.91
SSH1-207ENST00000547862 C15orf59Q2T9L4 293 aaPredicted RBP20.76■□□□□ 0.91
SSH1-207ENST00000547862 LEKR1Q6ZMV7 388 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 Q6ZSR6 202 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 PCDH20Q8N6Y1 951 aaKnown RBP20.76■□□□□ 0.91
SSH1-207ENST00000547862 BAP1Q92560 729 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 C1orf74Q96LT6 269 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 HAPLN3Q96S86 360 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 HEPHQ9BQS7 1158 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 NRSN2Q9GZP1 204 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 DACH1Q9UI36 760 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 ITM2BQ9Y287 266 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 PCDHB1Q9Y5F3 818 aa20.76■□□□□ 0.91
SSH1-207ENST00000547862 RAD51BO15315 384 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 RRP8O43159 456 aaKnown RBP20.75■□□□□ 0.91
SSH1-207ENST00000547862 ZNF821O75541 412 aaPredicted RBP20.75■□□□□ 0.91
SSH1-207ENST00000547862 ZMPSTE24O75844 475 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 MT-CO3P00414 261 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 ITGB7P26010 798 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 CCDC173Q0VFZ6 552 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 FGL2Q14314 439 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 RTP5Q14D33 572 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 TMEM259Q4ZIN3 620 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 CARD16Q5EG05 197 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 C11orf70Q9BRQ4 267 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 CEP44Q9C0F1 390 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 ZNF212Q9UDV6 495 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 DNAI1Q9UI46 699 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 GGT7Q9UJ14 662 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 TMEM59LQ9UK28 342 aa20.75■□□□□ 0.91
SSH1-207ENST00000547862 POM121BA6NF01 834 aa20.74■□□□□ 0.91
SSH1-207ENST00000547862 PAK4O96013 591 aaPredicted RBP20.74■□□□□ 0.91
SSH1-207ENST00000547862 KLK7P49862 253 aa20.74■□□□□ 0.91
SSH1-207ENST00000547862 RPS21P63220 83 aaKnown RBP20.74■□□□□ 0.91
SSH1-207ENST00000547862 LRRC73Q5JTD7 316 aa20.74■□□□□ 0.91
SSH1-207ENST00000547862 ARTNQ5T4W7 220 aa20.74■□□□□ 0.91
SSH1-207ENST00000547862 KIAA1161Q6NSJ0 714 aa20.74■□□□□ 0.91
SSH1-207ENST00000547862 ZNF783Q6ZMS7 281 aa20.74■□□□□ 0.91
SSH1-207ENST00000547862 ABI3BPQ7Z7G0 1075 aa20.74■□□□□ 0.91
SSH1-207ENST00000547862 ZNF354CQ86Y25 554 aa20.74■□□□□ 0.91
SSH1-207ENST00000547862 NAF1Q96HR8 494 aaKnown RBP20.74■□□□□ 0.91
SSH1-207ENST00000547862 APOLD1Q96LR9 279 aa20.74■□□□□ 0.91
SSH1-207ENST00000547862 SMG1Q96Q15 3661 aaKnown RBP20.74■□□□□ 0.91
SSH1-207ENST00000547862 NAA15Q9BXJ9 866 aaKnown RBP20.74■□□□□ 0.91
SSH1-207ENST00000547862 SLC17A9Q9BYT1 436 aa20.74■□□□□ 0.91
SSH1-207ENST00000547862 NUP62CLQ9H1M0 184 aa20.74■□□□□ 0.91
SSH1-207ENST00000547862 NDFIP2Q9NV92 336 aa20.74■□□□□ 0.91
SSH1-207ENST00000547862 HECAQ9UBI9 543 aaPredicted RBP20.74■□□□□ 0.91
SSH1-207ENST00000547862 FADS3Q9Y5Q0 445 aa20.74■□□□□ 0.91
SSH1-207ENST00000547862 NEMP1O14524 444 aa20.73■□□□□ 0.91
SSH1-207ENST00000547862 PRB1P04280 392 aa20.73■□□□□ 0.91
SSH1-207ENST00000547862 L1CAMP32004 1257 aa20.73■□□□□ 0.91
SSH1-207ENST00000547862 ABL2P42684 1182 aa20.73■□□□□ 0.91
SSH1-207ENST00000547862 E2F1Q01094 437 aa20.73■□□□□ 0.91
SSH1-207ENST00000547862 ACBD5Q5T8D3 534 aaPredicted RBP20.73■□□□□ 0.91
SSH1-207ENST00000547862 KYAT3Q6YP21 454 aaKnown RBP20.73■□□□□ 0.91
SSH1-207ENST00000547862 DCBLD1Q8N8Z6 715 aa20.73■□□□□ 0.91
SSH1-207ENST00000547862 JOSD2Q8TAC2 188 aa20.73■□□□□ 0.91
SSH1-207ENST00000547862 SLC30A5Q8TAD4 765 aa20.73■□□□□ 0.91
SSH1-207ENST00000547862 RXFP2Q8WXD0 754 aa20.73■□□□□ 0.91
SSH1-207ENST00000547862 RFFLQ8WZ73 363 aa20.73■□□□□ 0.91
SSH1-207ENST00000547862 FCRL3Q96P31 734 aaPredicted RBP20.73■□□□□ 0.91
SSH1-207ENST00000547862 OSBPL2Q9H1P3 480 aa20.73■□□□□ 0.91
SSH1-207ENST00000547862 NLGN3Q9NZ94 848 aa20.73■□□□□ 0.91
SSH1-207ENST00000547862 IPO11Q9UI26 975 aaKnown RBP20.73■□□□□ 0.91
SSH1-207ENST00000547862 RAI2Q9Y5P3 530 aa20.73■□□□□ 0.91
SSH1-207ENST00000547862 KRIT1O00522 736 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 GIMD1P0DJR0 217 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 ERCC5P28715 1186 aaPredicted RBP20.72■□□□□ 0.91
SSH1-207ENST00000547862 SDC4P31431 198 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 HNRNPKP61978 463 aaKnown RBP eCLIP20.72■□□□□ 0.91
SSH1-207ENST00000547862 ARL13BQ3SXY8 428 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 TCP11X2Q5H9J9 407 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 BNIPLQ7Z465 357 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 ZNF548Q8NEK5 533 aaPredicted RBP20.72■□□□□ 0.91
SSH1-207ENST00000547862 SNIP1Q8TAD8 396 aaKnown RBP20.72■□□□□ 0.91
SSH1-207ENST00000547862 GPT2Q8TD30 523 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 FEM1CQ96JP0 617 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 BMFQ96LC9 184 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 UBL7Q96S82 380 aaPredicted RBP20.72■□□□□ 0.91
SSH1-207ENST00000547862 STK33Q9BYT3 514 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 MAGEB5Q9BZ81 275 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 VPS16Q9H269 839 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 GANQ9H2C0 597 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 NLRC4Q9NPP4 1024 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 OR12D3Q9UGF7 316 aa20.72■□□□□ 0.91
SSH1-207ENST00000547862 NOCTQ9UK39 431 aaKnown RBP20.72■□□□□ 0.91
SSH1-207ENST00000547862 LRRK1Q38SD2 2015 aa20.71■□□□□ 0.91
SSH1-207ENST00000547862 IGLON5A6NGN9 336 aa20.71■□□□□ 0.91
SSH1-207ENST00000547862 FAM72CH0Y354 149 aa20.71■□□□□ 0.91
SSH1-207ENST00000547862 H3BM21 787 aa20.71■□□□□ 0.91
SSH1-207ENST00000547862 MPOP05164 745 aa20.71■□□□□ 0.91
SSH1-207ENST00000547862 UGT2B4P06133 528 aa20.71■□□□□ 0.91
SSH1-207ENST00000547862 CKMT1AP12532 417 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms