RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 GSTA1P08263 222 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 ARSAP15289 507 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 MSX2P35548 267 aaPredicted RBP12.9□□□□□ -0.34
SCAF11-209ENST00000547018 MAGEA6P43360 314 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 NIPAL4Q0D2K0 466 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 SCAPQ12770 1279 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 ZNF235Q14590 738 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 RBM20Q5T481 1227 aaKnown RBP12.9□□□□□ -0.34
SCAF11-209ENST00000547018 PPHLN1Q8NEY8 458 aaKnown RBP12.9□□□□□ -0.34
SCAF11-209ENST00000547018 SHKBP1Q8TBC3 707 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 RBBP8Q99708 897 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 CPNE1Q99829 537 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 OSBPL1AQ9BXW6 950 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 SMOC2Q9H3U7 446 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 ZNF180Q9UJW8 692 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 CLGNO14967 610 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 CHUKO15111 745 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 SKAP2O75563 359 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-209ENST00000547018 ARRB2P32121 409 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 ARL1P40616 181 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-209ENST00000547018 VEGFBP49765 207 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 PSEN1P49768 467 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 NAPRTQ6XQN6 538 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 FAM43BQ6ZT52 329 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-209ENST00000547018 ZNF781Q8N8C0 355 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 RTL3Q8N8U3 475 aaKnown RBP12.89□□□□□ -0.35
SCAF11-209ENST00000547018 SEPT8Q92599 483 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 NXNL1Q96CM4 212 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 TSPAN18Q96SJ8 248 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 IL22Q9GZX6 179 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 RRN3Q9NYV6 651 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 NKX1-2Q9UD57 310 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-209ENST00000547018 FETUBQ9UGM5 382 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 EOMESO95936 686 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 DHRS4L1P0CG22 281 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 MLNP12872 115 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 HNRNPLP14866 589 aaKnown RBP eCLIP12.89□□□□□ -0.355e-7■■■□□ 16.2
SCAF11-209ENST00000547018 EZRP15311 586 aaKnown RBP12.89□□□□□ -0.35
SCAF11-209ENST00000547018 GJA1P17302 382 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 PCLAFQ15004 111 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 MARK2Q7KZI7 788 aaKnown RBP12.89□□□□□ -0.35
SCAF11-209ENST00000547018 FAM13CQ8NE31 585 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 HDAC10Q969S8 669 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 SLC7A6OSQ96CW6 309 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-209ENST00000547018 IFT43Q96FT9 208 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 NSL1Q96IY1 281 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 PKMYT1Q99640 499 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 ZYG11BQ9C0D3 744 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 FBXO44Q9H4M3 255 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 NMRAL1Q9HBL8 299 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 BPIFA1Q9NP55 256 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 CASS4Q9NQ75 786 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 TLR8Q9NR97 1041 aaKnown RBP12.89□□□□□ -0.35
SCAF11-209ENST00000547018 TMEM161AQ9NX61 479 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 APOBEC2Q9Y235 224 aaKnown RBP12.89□□□□□ -0.35
SCAF11-209ENST00000547018 HBS1LQ9Y450 684 aaKnown RBP12.89□□□□□ -0.35
SCAF11-209ENST00000547018 TRPM7Q96QT4 1865 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 ATXN2Q99700 1313 aaKnown RBP12.89□□□□□ -0.35
SCAF11-209ENST00000547018 ARHGEF37A1IGU5 675 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 TMEM233B4DJY2 109 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 MATN3O15232 486 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 DCXO43602 365 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 BAG2O95816 211 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 GALTP07902 379 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 ACRP10323 421 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 TSHRP16473 764 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 EPHA3P29320 983 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 SERPINB5P36952 375 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 SLC25A3Q00325 362 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 TLE2Q04725 743 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 GEN1Q17RS7 908 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 MAP3K21Q5TCX8 1036 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 CEP97Q8IW35 865 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 RNF148Q8N7C7 305 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 FBXO22Q8NEZ5 403 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 IRGQQ8WZA9 623 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 ERLEC1Q96DZ1 483 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 UROC1Q96N76 676 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 FAM167BQ9BTA0 163 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 NUF2Q9BZD4 464 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 ZCWPW1Q9H0M4 648 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 GTSE1Q9NYZ3 720 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 COPG2Q9UBF2 871 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 AAR2Q9Y312 384 aaKnown RBP12.89□□□□□ -0.35
SCAF11-209ENST00000547018 XIRP2A4UGR9 3374 aa12.89□□□□□ -0.35
SCAF11-209ENST00000547018 CFAP73A6NFT4 308 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.88□□□□□ -0.35
SCAF11-209ENST00000547018 PRRG1O14668 218 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 MTSS1O43312 755 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 ANXA9O76027 345 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 CD1EP15812 388 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 TYMPP19971 482 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 MPSTP25325 297 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 GABRB3P28472 473 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 SLC1A2P43004 574 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 TAS2R39P59534 338 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 DSC1Q08554 894 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 CFAP61Q8NHU2 1237 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 MIPEPQ99797 713 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 NAT9Q9BTE0 207 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms