RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 SYCP2LQ5T4T6 812 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 TBC1D9BQ66K14 1250 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 WBP2NLQ6ICG8 309 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 TANGO2Q6ICL3 276 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 AADACL2Q6P093 401 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 RASGRP2Q7LDG7 609 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 WDR5BQ86VZ2 330 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 INPP4AQ96PE3 977 aaPredicted RBP4.42□□□□□ -1.7
CCDC38-204ENST00000546816 TRAPPC9Q96Q05 1148 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 CRB3Q9BUF7 120 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 HERC2P3Q9BVR0 1158 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 ACAD9Q9H845 621 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 DACT1Q9NYF0 836 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 LRFN1Q9P244 771 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 UPB1Q9UBR1 384 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 KIF26BQ2KJY2 2108 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 TARSL2A2RTX5 802 aaKnown RBP4.41□□□□□ -1.7
CCDC38-204ENST00000546816 DDTLA6NHG4 134 aaPredicted RBP4.41□□□□□ -1.7
CCDC38-204ENST00000546816 ASAP2O43150 1006 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 KRT36O76013 467 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 CYP4B1P13584 511 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 NAGAP17050 411 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 RPS6KA3P51812 740 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 BNC1Q01954 994 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 ICA1Q05084 483 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 PDCLQ13371 301 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 ZRSR1Q15695 479 aaKnown RBP4.41□□□□□ -1.7
CCDC38-204ENST00000546816 TMEM268Q5VZI3 342 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 HIST2H2BCQ6DN03 193 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 SYNE3Q6ZMZ3 975 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 RINLQ6ZS11 566 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 H1FNTQ75WM6 255 aaPredicted RBP4.41□□□□□ -1.7
CCDC38-204ENST00000546816 BRSK2Q8IWQ3 736 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 SCAIQ8N9R8 606 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 RTP4Q96DX8 246 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 IFT27Q9BW83 186 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 ZNF700Q9H0M5 742 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 IL25Q9H293 177 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 THAP1Q9NVV9 213 aa4.41□□□□□ -1.7
CCDC38-204ENST00000546816 PLSCR5A0PG75 271 aa4.4□□□□□ -1.71
CCDC38-204ENST00000546816 H0Y3Z8 333 aa4.4□□□□□ -1.71
CCDC38-204ENST00000546816 SYN3O14994 580 aa4.4□□□□□ -1.71
CCDC38-204ENST00000546816 GRSF1Q12849 480 aaKnown RBP eCLIP4.4□□□□□ -1.71
CCDC38-204ENST00000546816 TRAF2Q12933 501 aa4.4□□□□□ -1.71
CCDC38-204ENST00000546816 PLCB4Q15147 1175 aa4.4□□□□□ -1.71
CCDC38-204ENST00000546816 SYT13Q7L8C5 426 aa4.4□□□□□ -1.71
CCDC38-204ENST00000546816 FJX1Q86VR8 437 aa4.4□□□□□ -1.71
CCDC38-204ENST00000546816 OR14A16Q8NHC5 309 aa4.4□□□□□ -1.71
CCDC38-204ENST00000546816 FAM216AQ8WUB2 273 aa4.4□□□□□ -1.71
CCDC38-204ENST00000546816 TMED6Q8WW62 240 aa4.4□□□□□ -1.71
CCDC38-204ENST00000546816 TEFMQ96QE5 360 aaKnown RBP4.4□□□□□ -1.71
CCDC38-204ENST00000546816 GFM1Q96RP9 751 aaKnown RBP4.4□□□□□ -1.71
CCDC38-204ENST00000546816 SPRY4Q9C004 299 aa4.4□□□□□ -1.71
CCDC38-204ENST00000546816 RETREG1Q9H6L5 497 aa4.4□□□□□ -1.71
CCDC38-204ENST00000546816 PLEKHA2Q9HB19 425 aa4.4□□□□□ -1.71
CCDC38-204ENST00000546816 TMLHEQ9NVH6 421 aa4.4□□□□□ -1.71
CCDC38-204ENST00000546816 SRPRBQ9Y5M8 271 aaKnown RBP4.4□□□□□ -1.71
CCDC38-204ENST00000546816 IGHV4-28A0A0C4DH34 117 aa4.39□□□□□ -1.71
CCDC38-204ENST00000546816 CCNT1O60563 726 aaKnown RBP4.39□□□□□ -1.71
CCDC38-204ENST00000546816 CSTBP04080 98 aaKnown RBP4.39□□□□□ -1.71
CCDC38-204ENST00000546816 RFC1P35251 1148 aaPredicted RBP4.39□□□□□ -1.71
CCDC38-204ENST00000546816 DPP6P42658 865 aa4.39□□□□□ -1.71
CCDC38-204ENST00000546816 MVDP53602 400 aa4.39□□□□□ -1.71
CCDC38-204ENST00000546816 FOXO1Q12778 655 aa4.39□□□□□ -1.71
CCDC38-204ENST00000546816 MYBPC2Q14324 1141 aa4.39□□□□□ -1.71
CCDC38-204ENST00000546816 SMAD1Q15797 465 aaKnown RBP4.39□□□□□ -1.71
CCDC38-204ENST00000546816 KIF19Q2TAC6 998 aa4.39□□□□□ -1.71
CCDC38-204ENST00000546816 MEX3BQ6ZN04 569 aaKnown RBP4.39□□□□□ -1.71
CCDC38-204ENST00000546816 MON1BQ7L1V2 547 aa4.39□□□□□ -1.71
CCDC38-204ENST00000546816 CACNA2D3Q8IZS8 1091 aa4.39□□□□□ -1.71
CCDC38-204ENST00000546816 RBFAQ8N0V3 343 aa4.39□□□□□ -1.71
CCDC38-204ENST00000546816 RFLNBQ8N5W9 214 aa4.39□□□□□ -1.71
CCDC38-204ENST00000546816 MIGA1Q8NAN2 632 aa4.39□□□□□ -1.71
CCDC38-204ENST00000546816 DUX5Q96PT3 197 aa4.39□□□□□ -1.71
CCDC38-204ENST00000546816 OCIAD1Q9NX40 245 aa4.39□□□□□ -1.71
CCDC38-204ENST00000546816 IGLV5-52A0A0A0MRZ9 124 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 LOC102724159A0A0B4J2E5 919 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 E7EVH7 732 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 IGLV2-11P01706 119 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 SP1P08047 785 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 SNRNP70P08621 437 aaKnown RBP4.38□□□□□ -1.71
CCDC38-204ENST00000546816 CSF1P09603 554 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 MTNR1AP48039 350 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 PWP2Q15269 919 aaKnown RBP4.38□□□□□ -1.71
CCDC38-204ENST00000546816 FSIP1Q8NA03 581 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 OR6Y1Q8NGX8 325 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 TMEM18Q96B42 140 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 SLC39A13Q96H72 371 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 FIZ1Q96SL8 496 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 PKP4Q99569 1192 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 SLC25A33Q9BSK2 321 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 LHPPQ9H008 270 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 G6PC2Q9NQR9 355 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 GRHL1Q9NZI5 618 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 NLKQ9UBE8 527 aa4.38□□□□□ -1.71
CCDC38-204ENST00000546816 SRP68Q9UHB9 627 aaKnown RBP4.38□□□□□ -1.71
CCDC38-204ENST00000546816 EYA2O00167 538 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 KCNJ13O60928 360 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 PNPLA4P41247 253 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 PRKAA2P54646 552 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms