RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 SCAMP1O15126 338 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 CASC3O15234 703 aaKnown RBP12.81□□□□□ -0.36
COPS7A-221ENST00000546229 FFAR2O15552 330 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 BNIP3LO60238 219 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 NEBLO76041 1014 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 FGFR1OPO95684 399 aaKnown RBP12.81□□□□□ -0.36
COPS7A-221ENST00000546229 CSF2P04141 144 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 GP1BAP07359 652 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 CYP11B1P15538 503 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 ZNF18P17022 549 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 CCNHP51946 323 aaPredicted RBP12.81□□□□□ -0.36
COPS7A-221ENST00000546229 NEK3P51956 506 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 PDX1P52945 283 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 NOMO3P69849 1222 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 E2F1Q01094 437 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 C2CD6Q53TS8 623 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 IGF2-ASQ6U949 168 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 ARCQ7LC44 396 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 NOP9Q86U38 636 aaKnown RBP12.81□□□□□ -0.36
COPS7A-221ENST00000546229 NLRP14Q86W24 1093 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 ZNF843Q8N446 348 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 PCDH20Q8N6Y1 951 aaKnown RBP12.81□□□□□ -0.36
COPS7A-221ENST00000546229 BAP1Q92560 729 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 PRR11Q96HE9 360 aaPredicted RBP12.81□□□□□ -0.36
COPS7A-221ENST00000546229 HAPLN3Q96S86 360 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 C1QTNF2Q9BXJ5 285 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 CALN1Q9BXU9 219 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 WDCPQ9H6R7 721 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 STAP1Q9ULZ2 295 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 HS3ST3A1Q9Y663 406 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 LRRK1Q38SD2 2015 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 COL6A6A6NMZ7 2263 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 RP1P56715 2156 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 CXorf51AA0A1B0GTR3 108 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 TEX51A0A1B0GUA7 166 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 L1CAMP32004 1257 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 ACTN2P35609 894 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 PFN3P60673 137 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 NRG1Q02297 640 aaPredicted RBP12.8□□□□□ -0.36
COPS7A-221ENST00000546229 DEUP1Q05D60 604 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 CCDC173Q0VFZ6 552 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 EIF2B5Q13144 721 aaKnown RBP12.8□□□□□ -0.36
COPS7A-221ENST00000546229 MAN2A1Q16706 1144 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 ZNF542PQ5EBM4 170 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 FAM102AQ5T9C2 384 aaPredicted RBP12.8□□□□□ -0.36
COPS7A-221ENST00000546229 KIAA1161Q6NSJ0 714 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 Q6ZSR6 202 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 TMC6Q7Z403 805 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 EPS8L1Q8TE68 723 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 SNRNP27Q8WVK2 155 aaKnown RBP12.8□□□□□ -0.36
COPS7A-221ENST00000546229 CCDC114Q96M63 670 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 CFAP57Q96MR6 1250 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 LENG8Q96PV6 779 aaPredicted RBP12.8□□□□□ -0.36
COPS7A-221ENST00000546229 PPARGC1AQ9UBK2 798 aaKnown RBP12.8□□□□□ -0.36
COPS7A-221ENST00000546229 NOCTQ9UK39 431 aaKnown RBP12.8□□□□□ -0.36
COPS7A-221ENST00000546229 ITM2BQ9Y287 266 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 FCF1Q9Y324 198 aaKnown RBP12.8□□□□□ -0.36
COPS7A-221ENST00000546229 KIF26BQ2KJY2 2108 aa12.8□□□□□ -0.36
COPS7A-221ENST00000546229 FAM170AA1A519 330 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 PMS2P1A4D2B8 440 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 AREL1O15033 823 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 RRP8O43159 456 aaKnown RBP12.79□□□□□ -0.36
COPS7A-221ENST00000546229 CSO75390 466 aaKnown RBP12.79□□□□□ -0.36
COPS7A-221ENST00000546229 ZIC2O95409 532 aaPredicted RBP12.79□□□□□ -0.36
COPS7A-221ENST00000546229 LSM8O95777 96 aaKnown RBP12.79□□□□□ -0.36
COPS7A-221ENST00000546229 MPOP05164 745 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 PLA2G2AP14555 144 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 TGM2P21980 687 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 OR1E1P30953 314 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 GKP32189 559 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 KRT9P35527 623 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 ACVRL1P37023 503 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 LSSP48449 732 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 RNASE9P60153 205 aaKnown RBP12.79□□□□□ -0.36
COPS7A-221ENST00000546229 RPS21P63220 83 aaKnown RBP12.79□□□□□ -0.36
COPS7A-221ENST00000546229 GNA12Q03113 381 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 DRAP1Q14919 205 aaPredicted RBP12.79□□□□□ -0.36
COPS7A-221ENST00000546229 ACBD5Q5T8D3 534 aaPredicted RBP12.79□□□□□ -0.36
COPS7A-221ENST00000546229 KLHDC7AQ5VTJ3 777 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 GUSBP11Q6P575 273 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 LRRC69Q6ZNQ3 347 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 PTAR1Q7Z6K3 402 aaPredicted RBP12.79□□□□□ -0.36
COPS7A-221ENST00000546229 PARGQ86W56 976 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 FAM131BQ86XD5 332 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 PLPP6Q8IY26 295 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 TMEM35BQ8NCS4 154 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 FAM174AQ8TBP5 190 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 ASB12Q8WXK4 309 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 ISG20Q96AZ6 181 aaKnown RBP12.79□□□□□ -0.36
COPS7A-221ENST00000546229 C18orf8Q96DM3 657 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 ZNF578Q96N58 590 aaPredicted RBP12.79□□□□□ -0.36
COPS7A-221ENST00000546229 HEPHQ9BQS7 1158 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 SLC17A9Q9BYT1 436 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 MAGEB5Q9BZ81 275 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 ZYG11BQ9C0D3 744 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 NDST4Q9H3R1 872 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 USP29Q9HBJ7 922 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 CSNK1G3Q9Y6M4 447 aa12.79□□□□□ -0.36
COPS7A-221ENST00000546229 MYO18BQ8IUG5 2567 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 F8VZ95 297 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms