RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 USP36Q9P275 1121 aaKnown RBP17.79■□□□□ 0.44
CD9-211ENST00000546073 FZD4Q9ULV1 537 aa17.79■□□□□ 0.44
CD9-211ENST00000546073 TPX2Q9ULW0 747 aaKnown RBP17.79■□□□□ 0.44
CD9-211ENST00000546073 PCDHA3Q9Y5H8 950 aa17.79■□□□□ 0.44
CD9-211ENST00000546073 HEY1Q9Y5J3 304 aa17.79■□□□□ 0.44
CD9-211ENST00000546073 ZNF318Q5VUA4 2279 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 MID1O15344 667 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 SMAD6O43541 496 aaKnown RBP17.78■□□□□ 0.44
CD9-211ENST00000546073 FOXD2O60548 495 aaPredicted RBP17.78■□□□□ 0.44
CD9-211ENST00000546073 RETP07949 1114 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 GNSP15586 552 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 CTNNA1P35221 906 aaKnown RBP17.78■□□□□ 0.44
CD9-211ENST00000546073 NR2C2P49116 596 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 ARSEP51690 589 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 CCNHP51946 323 aaPredicted RBP17.78■□□□□ 0.44
CD9-211ENST00000546073 ITKQ08881 620 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 CCDC173Q0VFZ6 552 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 LBRQ14739 615 aaKnown RBP17.78■□□□□ 0.44
CD9-211ENST00000546073 PDK1Q15118 436 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 LPAL2Q16609 132 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 MYLK3Q32MK0 819 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 PLK5Q496M5 336 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 LYSMD4Q5XG99 296 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 FBXL19Q6PCT2 694 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 DPY19L3Q6ZPD9 716 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 CYP2U1Q7Z449 544 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 CADM4Q8NFZ8 388 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 OR2A12Q8NGT7 310 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 PCDH19Q8TAB3 1148 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 GRIN3AQ8TCU5 1115 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 P3H4Q92791 437 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 FAM129BQ96TA1 746 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 PCED1AQ9H1Q7 454 aa17.78■□□□□ 0.44
CD9-211ENST00000546073 NOL6Q9H6R4 1146 aaKnown RBP17.78■□□□□ 0.44
CD9-211ENST00000546073 IGHV1OR15-9A0A0B4J2B8 117 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 A0A1W2PP55 124 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 FAM47DPA6NHR8 397 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 J3KR12 359 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 SLC7A4O43246 635 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 VAV1P15498 845 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 IL4RP24394 825 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 PLA2G5P39877 138 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 DYNLT1P63172 113 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 ARSIQ5FYB1 569 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 AFMIDQ63HM1 303 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 NCBP2-AS2Q69YL0 99 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.77■□□□□ 0.44
CD9-211ENST00000546073 SPOCD1Q6ZMY3 1216 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 CPNE8Q86YQ8 564 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 FAM160A2Q8N612 972 aaPredicted RBP17.77■□□□□ 0.44
CD9-211ENST00000546073 NPWQ8N729 165 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 TRIM58Q8NG06 486 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 OR14C36Q8NHC7 312 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 FAF2Q96CS3 445 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 GPR174Q9BXC1 333 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 CD248Q9HCU0 757 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 WSB2Q9NYS7 404 aaPredicted RBP17.77■□□□□ 0.44
CD9-211ENST00000546073 PPM1HQ9ULR3 514 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 PCDHGA5Q9Y5G8 931 aa17.77■□□□□ 0.44
CD9-211ENST00000546073 ATG2BQ96BY7 2078 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 TBC1D3DA0A087WVF3 549 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 TBC1D3IA0A087WXS9 549 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 TBC1D3EA0A087X179 549 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 TBC1D3KA0A087X1G2 549 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 TBC1D3FA6NER0 549 aaPredicted RBP17.76■□□□□ 0.43
CD9-211ENST00000546073 TBC1D3LB9A6J9 549 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 NEMP1O14524 444 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 GFRA3O60609 400 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 ZNF189O75820 626 aaPredicted RBP17.76■□□□□ 0.43
CD9-211ENST00000546073 TJP3O95049 919 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 SEMA4FO95754 770 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 TBC1D3HP0C7X1 549 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 KRT10P13645 584 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 TGM2P21980 687 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 CES1P23141 567 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 CCNCP24863 283 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 GARSP41250 739 aaKnown RBP17.76■□□□□ 0.43
CD9-211ENST00000546073 CREB5Q02930 508 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 NSUN2Q08J23 767 aaKnown RBP eCLIP17.76■□□□□ 0.43
CD9-211ENST00000546073 ARTNQ5T4W7 220 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 TBC1D3GQ6DHY5 549 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 TBC1D3CQ6IPX1 549 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 ZNF662Q6ZS27 426 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 ARHGAP12Q8IWW6 846 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 TMEFF1Q8IYR6 380 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 TBC1D3Q8IZP1 549 aaPredicted RBP17.76■□□□□ 0.43
CD9-211ENST00000546073 SNX19Q92543 992 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 HAUS1Q96CS2 278 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 DUSP15Q9H1R2 295 aaPredicted RBP17.76■□□□□ 0.43
CD9-211ENST00000546073 KDM4CQ9H3R0 1056 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 GOLPH3Q9H4A6 298 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 ATP13A3Q9H7F0 1226 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 ETNK2Q9NVF9 386 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 SUSD2Q9UGT4 822 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 PPP2R2CQ9Y2T4 447 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 CACNA1IQ9P0X4 2223 aa17.76■□□□□ 0.43
CD9-211ENST00000546073 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.75■□□□□ 0.43
CD9-211ENST00000546073 GRID2IPA4D2P6 1211 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 CST8O60676 142 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms