RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 C1orf74Q96LT6 269 aa17.03■□□□□ 0.32
CPSF7-225ENST00000545934 KLF6Q99612 283 aaPredicted RBP17.03■□□□□ 0.32
CPSF7-225ENST00000545934 SLC17A9Q9BYT1 436 aa17.03■□□□□ 0.32
CPSF7-225ENST00000545934 TKTL2Q9H0I9 626 aa17.03■□□□□ 0.32
CPSF7-225ENST00000545934 SIK2Q9H0K1 926 aa17.03■□□□□ 0.32
CPSF7-225ENST00000545934 EVA1BQ9NVM1 165 aa17.03■□□□□ 0.32
CPSF7-225ENST00000545934 RRN3Q9NYV6 651 aa17.03■□□□□ 0.32
CPSF7-225ENST00000545934 FADS3Q9Y5Q0 445 aa17.03■□□□□ 0.32
CPSF7-225ENST00000545934 MYO18BQ8IUG5 2567 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 EME2A4GXA9 379 aaPredicted RBP17.02■□□□□ 0.32
CPSF7-225ENST00000545934 KLK10O43240 276 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 AP1G1O43747 822 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 LEFTY1O75610 366 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 ZMPSTE24O75844 475 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 ADRB3P13945 408 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 TFE3P19532 575 aaPredicted RBP17.02■□□□□ 0.32
CPSF7-225ENST00000545934 SLC9A1P19634 815 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 ITGB7P26010 798 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 NEK3P51956 506 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 RPS21P63220 83 aaKnown RBP17.02■□□□□ 0.32
CPSF7-225ENST00000545934 VAC14Q08AM6 782 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 LINGO4Q6UY18 593 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 PTAR1Q7Z6K3 402 aaPredicted RBP17.02■□□□□ 0.32
CPSF7-225ENST00000545934 C1orf131Q8NDD1 294 aaKnown RBP17.02■□□□□ 0.32
CPSF7-225ENST00000545934 GRIN3AQ8TCU5 1115 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 GRAMD1AQ96CP6 724 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 PPP1R16AQ96I34 528 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 SLC46A1Q96NT5 459 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 LENG8Q96PV6 779 aaPredicted RBP17.02■□□□□ 0.32
CPSF7-225ENST00000545934 SRRTQ9BXP5 876 aaKnown RBP17.02■□□□□ 0.32
CPSF7-225ENST00000545934 CEP44Q9C0F1 390 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 OSBPL2Q9H1P3 480 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 TNKS2Q9H2K2 1166 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 THSD1Q9NS62 852 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 KLF15Q9UIH9 416 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 SALL4Q9UJQ4 1053 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 SATB2Q9UPW6 733 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 ENTPD2Q9Y5L3 495 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 SNX10Q9Y5X0 201 aa17.02■□□□□ 0.32
CPSF7-225ENST00000545934 BSNQ9UPA5 3926 aa17.02■□□□□ 0.31
CPSF7-225ENST00000545934 PAK4O96013 591 aaPredicted RBP17.01■□□□□ 0.31
CPSF7-225ENST00000545934 L1CAMP32004 1257 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 RABIFP47224 123 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 STX17P56962 302 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 APBA1Q02410 837 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 ARHGAP44Q17R89 818 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 TPRG1LQ5T0D9 272 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 ZNF783Q6ZMS7 281 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 ZSCAN30Q86W11 494 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 PARGQ86W56 976 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 ZDHHC17Q8IUH5 632 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 VOPP1Q96AW1 172 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 C1QTNF2Q9BXJ5 285 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 ABCG4Q9H172 646 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 WDCPQ9H6R7 721 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 NCKIPSDQ9NZQ3 722 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 APEX2Q9UBZ4 518 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 PCDHGA8Q9Y5G5 932 aa17.01■□□□□ 0.31
CPSF7-225ENST00000545934 ANKRD36A6QL64 1941 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 GOLGA6L4A6NEF3 574 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 CDRT15L2A8MXV6 281 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 H3BM21 787 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 TPP1O14773 563 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 SPINT1O43278 529 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 SERPINH1P50454 418 aaKnown RBP17■□□□□ 0.31
CPSF7-225ENST00000545934 ARF5P84085 180 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 PAK1Q13153 545 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 CDKN3Q16667 212 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 C3orf38Q5JPI3 329 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 ACBD5Q5T8D3 534 aaPredicted RBP17■□□□□ 0.31
CPSF7-225ENST00000545934 GUSBP11Q6P575 273 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 BNIPLQ7Z465 357 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 PCDH20Q8N6Y1 951 aaKnown RBP17■□□□□ 0.31
CPSF7-225ENST00000545934 OR7D4Q8NG98 312 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 ASB12Q8WXK4 309 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 ATXN7L3BQ96GX2 97 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 CRACR2AQ9BSW2 395 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 TMPRSS4Q9NRS4 437 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17■□□□□ 0.315e-9■■□□□ 12.4
CPSF7-225ENST00000545934 MPP6Q9NZW5 540 aa17■□□□□ 0.31
CPSF7-225ENST00000545934 AJAP1Q9UKB5 411 aaPredicted RBP17■□□□□ 0.31
CPSF7-225ENST00000545934 ILVBLA1L0T0 632 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 B8ZZF3 427 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 K7ENP7 123 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 AQP9O43315 295 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 TCEA3O75764 348 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 CD160O95971 181 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 USP8P40818 1118 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 RECQLP46063 649 aaPredicted RBP16.99■□□□□ 0.31
CPSF7-225ENST00000545934 SNX16P57768 344 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 PFN3P60673 137 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 C1QBPQ07021 282 aaKnown RBP16.99■□□□□ 0.31
CPSF7-225ENST00000545934 SLC20A2Q08357 652 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 EIF2B5Q13144 721 aaKnown RBP16.99■□□□□ 0.31
CPSF7-225ENST00000545934 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
CPSF7-225ENST00000545934 LY6DQ14210 128 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 RETSATQ6NUM9 610 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 INO80CQ6PI98 192 aaPredicted RBP16.99■□□□□ 0.31
CPSF7-225ENST00000545934 LRRC31Q6UY01 552 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 PARS2Q7L3T8 475 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms