RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 KCNJ1P48048 391 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 DHPSP49366 369 aaPredicted RBP8.72□□□□□ -1.01
CLIP1-218ENST00000545889 GCNT1Q02742 428 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 C16orf72Q14CZ0 275 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 ZNF554Q86TJ5 538 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 UNC93AQ86WB7 457 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 NPAS4Q8IUM7 802 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 ERP27Q96DN0 273 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 ZFYVE19Q96K21 471 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 KREMEN1Q96MU8 473 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 TMEM237Q96Q45 408 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 SHOC2Q9UQ13 582 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 GNEQ9Y223 722 aaKnown RBP8.72□□□□□ -1.01
CLIP1-218ENST00000545889 EIF3LQ9Y262 564 aaKnown RBP8.72□□□□□ -1.01
CLIP1-218ENST00000545889 SLC27A6Q9Y2P4 619 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 PHIPQ8WWQ0 1821 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 IGKV6D-21A0A0A0MT36 114 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 LRRC72A6NJI9 287 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 HAUS5O94927 633 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 STAU1O95793 577 aaKnown RBP8.72□□□□□ -1.01
CLIP1-218ENST00000545889 ALPPL2P10696 532 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 PBX1P40424 430 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 ABL2P42684 1182 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 STX3Q13277 289 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 RIPK1Q13546 671 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 PRRC2BQ5JSZ5 2229 aaKnown RBP8.72□□□□□ -1.01
CLIP1-218ENST00000545889 FAAH2Q6GMR7 532 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 IRGCQ6NXR0 463 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 LRRC8BQ6P9F7 803 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 NCCRP1Q6ZVX7 275 aaPredicted RBP8.72□□□□□ -1.01
CLIP1-218ENST00000545889 ZSCAN18Q8TBC5 510 aaPredicted RBP8.72□□□□□ -1.01
CLIP1-218ENST00000545889 PLEKHO2Q8TD55 490 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 ATP13A3Q9H7F0 1226 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 ETNK2Q9NVF9 386 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 HAO1Q9UJM8 370 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 LRCH1Q9Y2L9 728 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 MYH11P35749 1972 aa8.72□□□□□ -1.01
CLIP1-218ENST00000545889 HS6ST1O60243 411 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 TCF3P15923 654 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 IL10P22301 178 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 PFKPQ01813 784 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 CYP2A13Q16696 494 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 SNX30Q5VWJ9 437 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 PAPD7Q5XG87 772 aaKnown RBP8.71□□□□□ -1.01
CLIP1-218ENST00000545889 OTOP3Q7RTS5 596 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 C1orf127Q8N9H9 656 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 PCYOX1LQ8NBM8 494 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 DIS3LQ8TF46 1054 aaKnown RBP8.71□□□□□ -1.01
CLIP1-218ENST00000545889 CASKIN2Q8WXE0 1202 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 FIZ1Q96SL8 496 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 POLR1EQ9GZS1 481 aaKnown RBP8.71□□□□□ -1.01
CLIP1-218ENST00000545889 TRABDQ9H4I3 376 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 RNPEPL1Q9HAU8 725 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 ARHGEF4Q9NR80 690 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 PRELID1Q9Y255 219 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 POLR1DQ9Y2S0 133 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 Q9Y3F1 56 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 SDR42E2A6NKP2 422 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 NOL4O94818 638 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 CCR4P51679 360 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 PWP1Q13610 501 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 MROH9Q5TGP6 573 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 GLT6D1Q7Z4J2 308 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 METTL3Q86U44 580 aaKnown RBP8.71□□□□□ -1.01
CLIP1-218ENST00000545889 PARGQ86W56 976 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 FAM9CQ8IZT9 166 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 RIBC1Q8N443 379 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-218ENST00000545889 C12orf29Q8N999 325 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 ZBTB8BQ8NAP8 495 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-218ENST00000545889 ATAD1Q8NBU5 361 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 KREMEN2Q8NCW0 462 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 TRPV1Q8NER1 839 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 OR14C36Q8NHC7 312 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 EPS8L1Q8TE68 723 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 STK32AQ8WU08 396 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 MAGED4Q96JG8 741 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 TBCBQ99426 244 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 FOXP3Q9BZS1 431 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 WWP1Q9H0M0 922 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 FANCEQ9HB96 536 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 RABL2AQ9UBK7 228 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-218ENST00000545889 WDR37Q9Y2I8 494 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 ARL2BPQ9Y2Y0 163 aa8.71□□□□□ -1.01
CLIP1-218ENST00000545889 RBMX2Q9Y388 322 aaKnown RBP8.71□□□□□ -1.01
CLIP1-218ENST00000545889 A0A1W2PQ45 241 aaPredicted RBP8.71□□□□□ -1.02
CLIP1-218ENST00000545889 A0A1W2PQY0 241 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 MYO1GB0I1T2 1018 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.71□□□□□ -1.02
CLIP1-218ENST00000545889 TBC1D4O60343 1298 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 CDH16O75309 829 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 NPR3P17342 541 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 CDH2P19022 906 aaPredicted RBP8.71□□□□□ -1.02
CLIP1-218ENST00000545889 GRK2P25098 689 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 MAPK1P28482 360 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 KDSRQ06136 332 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 POU6F1Q14863 301 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 ALFQ53S48 1182 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 ERMARDQ5T6L9 678 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 C11orf74Q86VG3 221 aa8.71□□□□□ -1.02
CLIP1-218ENST00000545889 TSTD1Q8NFU3 115 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms