RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 GNL1P36915 607 aaPredicted RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 PNPLA4P41247 253 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 GTF2A2P52657 109 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 PSME3P61289 254 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 ADIGQ0VDE8 80 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 CDH17Q12864 832 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 PPIL2Q13356 520 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 IKBKEQ14164 716 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 SQLEQ14534 574 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 USP10Q14694 798 aaKnown RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 DCAF6Q58WW2 860 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 CERCAMQ5T4B2 595 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 TMEM198Q66K66 360 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 HACD2Q6Y1H2 254 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 LIMS2Q7Z4I7 341 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 AMIGO2Q86SJ2 522 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 CENPLQ8N0S6 344 aaPredicted RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 LRRC43Q8N309 656 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 FSTL5Q8N475 847 aaPredicted RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 SLC2A14Q8TDB8 520 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 KCTD13Q8WZ19 329 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 FAM149B1Q96BN6 582 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 TMA16Q96EY4 203 aaKnown RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 TNIP3Q96KP6 325 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 ZMAT2Q96NC0 199 aaKnown RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 CCT7Q99832 543 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 SNX25Q9H3E2 840 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 DDX18Q9NVP1 670 aaKnown RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 NCKIPSDQ9NZQ3 722 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 PIM2Q9P1W9 311 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 TUBGCP4Q9UGJ1 667 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 MYRFQ9Y2G1 1151 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 ACOT9Q9Y305 439 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 PCDHGA7Q9Y5G6 932 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 COL4A4P53420 1690 aaPredicted RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 PLXNB2O15031 1838 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 HEATR9A2RTY3 570 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 H3BNH8 94 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 M0QYT0 321 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 ZBTB24O43167 697 aaPredicted RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 DLX3O60479 287 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 PEX10O60683 326 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 CD4P01730 458 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 ERCC2P18074 760 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 SLC7A1P30825 629 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 CD68P34810 354 aaPredicted RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 RAB10P61026 200 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 ZNF33AQ06730 810 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 GALNT2Q10471 571 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 OLIG2Q13516 323 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 PRPSAP1Q14558 356 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 GLRA4Q5JXX5 417 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 FBXO47Q5MNV8 452 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 IL23RQ5VWK5 629 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 OLFML2BQ68BL8 750 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 PIGZQ86VD9 579 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 CCDC117Q8IWD4 279 aaPredicted RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 RBM12BQ8IXT5 1001 aaKnown RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 ACVR1CQ8NER5 493 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 KCTD4Q8WVF5 259 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 COPS5Q92905 334 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 PPP1R36Q96LQ0 422 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 TSPAN18Q96SJ8 248 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 NPAS2Q99743 824 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 MRPL57Q9BQC6 102 aaKnown RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 FTHL17Q9BXU8 183 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 ANKRD60Q9BZ19 345 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 MRPL46Q9H2W6 279 aaKnown RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 TUBA8Q9NY65 449 aaPredicted RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 XPR1Q9UBH6 696 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 UBQLN1Q9UMX0 589 aaKnown RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 RUVBL2Q9Y230 463 aaKnown RBP8.87□□□□□ -0.99
TDP1-204ENST00000545686 RNF11Q9Y3C5 154 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 HES2Q9Y543 173 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 A0A087X1B8 175 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 STX16-NPEPL1H3BU86 382 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 ZNF701M0R085 212 aaPredicted RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 PIRO00625 290 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 PFDN1O60925 122 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 CNMDO75829 334 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 BMP10O95393 424 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 JUNP05412 331 aaKnown RBP8.86□□□□□ -0.99
TDP1-204ENST00000545686 IMPDH2P12268 514 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 NMBRP28336 390 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 PCSK6P29122 969 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 ADRA1BP35368 520 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 ABCG1P45844 678 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 TKTL1P51854 596 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 EMP3P54852 163 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 TPI1P60174 286 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 ARHGAP1Q07960 439 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 LAMC2Q13753 1193 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 LRP8Q14114 963 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 LPIN1Q14693 890 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 PRAMEF18Q5VWM3 479 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 FAM45BPQ6NSW5 357 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 SLC27A1Q6PCB7 646 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 CROCCP3Q8IVE0 287 aa8.86□□□□□ -0.99
TDP1-204ENST00000545686 PACRGLQ8N7B6 248 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms