RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	LEFTY1	O75610	366 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	RNF8	O76064	485 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	WNT1	P04628	370 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	GYPC	P04921	128 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	ITGB7	P26010	798 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	CD38	P28907	300 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	PCK1	P35558	622 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	CCNH	P51946	323 aa	Predicted RBP	13.65	□□□□□ -0.22
POLE-222	ENST00000545015	SERINC3	Q13530	473 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	ARSI	Q5FYB1	569 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	KCNT1	Q5JUK3	1230 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	ERMARD	Q5T6L9	678 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	ERN2	Q76MJ5	926 aa	Known RBP	13.65	□□□□□ -0.22
POLE-222	ENST00000545015	PRPF39	Q86UA1	669 aa	Known RBP	13.65	□□□□□ -0.22
POLE-222	ENST00000545015	VPS36	Q86VN1	386 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	ZSCAN30	Q86W11	494 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	MFSD2A	Q8NA29	543 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	ZNF653	Q96CK0	615 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	TNKS2	Q9H2K2	1166 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	LRRC19	Q9H756	370 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	ERVMER34-1	Q9H9K5	563 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	DYRK4	Q9NR20	520 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	IFNK	Q9P0W0	207 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	PCOLCE2	Q9UKZ9	415 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	AP4E1	Q9UPM8	1137 aa		13.65	□□□□□ -0.22
POLE-222	ENST00000545015	FCF1	Q9Y324	198 aa	Known RBP	13.65	□□□□□ -0.22
POLE-222	ENST00000545015	LUC7L2	Q9Y383	392 aa	Known RBP	13.65	□□□□□ -0.22
POLE-222	ENST00000545015		A0A1B0GTQ1	180 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	RASA4B	C9J798	803 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	KPNA3	O00505	521 aa	Predicted RBP	13.64	□□□□□ -0.23
POLE-222	ENST00000545015	RASA4	O43374	803 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	AP1G1	O43747	822 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	CREB3	O43889	395 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	LRCH4	O75427	683 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	TRIM16	O95361	564 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	TPM3	P06753	285 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	KCNA4	P22459	653 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	MIP	P30301	263 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	HCAR3	P49019	387 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	CCT8	P50990	548 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	NEK3	P51956	506 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	NDST2	P52849	883 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	C21orf59	P57076	290 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	SNRPD1	P62314	119 aa	Known RBP	13.64	□□□□□ -0.23
POLE-222	ENST00000545015	SUZ12	Q15022	739 aa	Known RBP	13.64	□□□□□ -0.23
POLE-222	ENST00000545015	SETMAR	Q53H47	684 aa	Predicted RBP	13.64	□□□□□ -0.23
POLE-222	ENST00000545015	TDRD12	Q587J7	1177 aa	Known RBP	13.64	□□□□□ -0.23
POLE-222	ENST00000545015	SLC45A4	Q5BKX6	768 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	DNAAF5	Q86Y56	855 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	NIPA2	Q8N8Q9	360 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	TMEM145	Q8NBT3	493 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	OR2AP1	Q8NGE2	309 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	SERAC1	Q96JX3	654 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	PEBP4	Q96S96	227 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	SNRNP25	Q9BV90	132 aa	Known RBP	13.64	□□□□□ -0.23
POLE-222	ENST00000545015	TRIM7	Q9C029	511 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	HECA	Q9UBI9	543 aa	Predicted RBP	13.64	□□□□□ -0.23
POLE-222	ENST00000545015	NENF	Q9UMX5	172 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	MFHAS1	Q9Y4C4	1052 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.64	□□□□□ -0.23	8e-11	■■□□□ 13.1
POLE-222	ENST00000545015	ACTL7A	Q9Y615	435 aa		13.64	□□□□□ -0.23
POLE-222	ENST00000545015	PRAMEF26	H0Y7S4	382 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015		H0Y8X5	98 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	WNT9A	O14904	365 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	YKT6	O15498	198 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	POP4	O95707	220 aa	Known RBP	13.63	□□□□□ -0.23
POLE-222	ENST00000545015	ADRB3	P13945	408 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	RXRG	P48443	463 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	NXPH1	P58417	271 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	TPI1	P60174	286 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	FAM193A	P78312	1265 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	SIM1	P81133	766 aa	Predicted RBP	13.63	□□□□□ -0.23
POLE-222	ENST00000545015	TRIP6	Q15654	476 aa	Known RBP	13.63	□□□□□ -0.23
POLE-222	ENST00000545015	CA9	Q16790	459 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	POM121L1P	Q3SYA9	428 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	TMEM259	Q4ZIN3	620 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	AFMID	Q63HM1	303 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	LAYN	Q6UX15	382 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	ADAT2	Q7Z6V5	191 aa	Known RBP	13.63	□□□□□ -0.23
POLE-222	ENST00000545015	HORMAD1	Q86X24	394 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	FAM174A	Q8TBP5	190 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	RAB7B	Q96AH8	199 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	HMCES	Q96FZ2	354 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	ELF4	Q99607	663 aa	Predicted RBP	13.63	□□□□□ -0.23
POLE-222	ENST00000545015	OSBPL1A	Q9BXW6	950 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	XPO4	Q9C0E2	1151 aa	Known RBP	13.63	□□□□□ -0.23
POLE-222	ENST00000545015	KLC2	Q9H0B6	622 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	PDF	Q9HBH1	243 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	AASDHPPT	Q9NRN7	309 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	KNL1	Q8NG31	2342 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	ACACB	O00763	2458 aa		13.63	□□□□□ -0.23
POLE-222	ENST00000545015	TPR	P12270	2363 aa	Known RBP	13.63	□□□□□ -0.23
POLE-222	ENST00000545015		A0A087X0T9	212 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	SPAAR	A0A1B0GVQ0	90 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	FAM221B	A6H8Z2	402 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	TLR4	O00206	839 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	EEF2K	O00418	725 aa	Known RBP	13.62	□□□□□ -0.23
POLE-222	ENST00000545015	CBFA2T2	O43439	604 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	BUB1	O43683	1085 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	PRPSAP2	O60256	369 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms