RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 ZNF26P17031 533 aaPredicted RBP5.34□□□□□ -1.55
USP28-213ENST00000544967 BGNP21810 368 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 GLRA2P23416 452 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 NFKBIAP25963 317 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 SERPINB6P35237 376 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 EIF2B2P49770 351 aaKnown RBP5.34□□□□□ -1.55
USP28-213ENST00000544967 ATN1P54259 1190 aaPredicted RBP5.34□□□□□ -1.55
USP28-213ENST00000544967 MFAP3P55082 362 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 TUBA1BP68363 451 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 FAM189BP81408 668 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 OVGP1Q12889 678 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 TRAP1Q12931 704 aaKnown RBP5.34□□□□□ -1.55
USP28-213ENST00000544967 NAB1Q13506 487 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 ZNF846Q147U1 533 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 CRTC2Q53ET0 693 aaPredicted RBP5.34□□□□□ -1.55
USP28-213ENST00000544967 CXCL17Q6UXB2 119 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 TUBA1AQ71U36 451 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 GALNT5Q7Z7M9 940 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 SLC26A11Q86WA9 606 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 TRIM50Q86XT4 487 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 KIAA0319LQ8IZA0 1049 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 PIWIL2Q8TC59 973 aaKnown RBP5.34□□□□□ -1.55
USP28-213ENST00000544967 ZNF347Q96SE7 839 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 PCDHB18PQ96TA0 734 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 ANKHQ9HCJ1 492 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 MRPL47Q9HD33 250 aaKnown RBP5.34□□□□□ -1.55
USP28-213ENST00000544967 SPO11Q9Y5K1 396 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 POTEB3A0JP26 581 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 ARHGAP42A6NI28 874 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 TBKBP1A7MCY6 615 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 COPEO14579 308 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 ACOX3O15254 700 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 KLHL41O60662 606 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 TBCAO75347 108 aaKnown RBP5.34□□□□□ -1.55
USP28-213ENST00000544967 H2AFYO75367 372 aaKnown RBP5.34□□□□□ -1.55
USP28-213ENST00000544967 DGAT1O75907 488 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 ZBTB11O95625 1053 aaPredicted RBP5.34□□□□□ -1.55
USP28-213ENST00000544967 CPNE6O95741 557 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 SNRPAP09012 282 aaKnown RBP5.34□□□□□ -1.55
USP28-213ENST00000544967 LINC00271P0C7V0 271 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 KRT10P13645 584 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 MYF6P23409 242 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 ITGB8P26012 769 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 PCYT1AP49585 367 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 MXI1P50539 228 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 BST1Q10588 318 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 ELOAQ14241 798 aaKnown RBP5.34□□□□□ -1.55
USP28-213ENST00000544967 PSMD6Q15008 389 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 INSCQ1MX18 579 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 SPATS1Q496A3 300 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 NANOGP8Q6NSW7 305 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 GJB7Q6PEY0 223 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 POTEBQ6S5H4 581 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 LACC1Q8IV20 430 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 DAW1Q8N136 415 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 CARNMT1Q8N4J0 409 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 FBXO27Q8NI29 283 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 PPP4R1Q8TF05 950 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 C12orf43Q96C57 262 aaKnown RBP5.34□□□□□ -1.55
USP28-213ENST00000544967 THAP11Q96EK4 314 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 NACC1Q96RE7 527 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 REEP2Q9BRK0 252 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 OSBPL10Q9BXB5 764 aa5.34□□□□□ -1.55
USP28-213ENST00000544967 RPF2Q9H7B2 306 aaKnown RBP5.34□□□□□ -1.55
USP28-213ENST00000544967 LRRIQ4A6NIV6 560 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 GOLGA8CPA6NN73 597 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 FOXO6A8MYZ6 492 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 E9PMD0 336 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 PSMD12O00232 456 aaPredicted RBP5.33□□□□□ -1.56
USP28-213ENST00000544967 TLR3O15455 904 aaKnown RBP5.33□□□□□ -1.56
USP28-213ENST00000544967 LZTS3O60299 673 aaPredicted RBP5.33□□□□□ -1.56
USP28-213ENST00000544967 EFCAB14O75071 495 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 TMEM127O75204 238 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 KATNA1O75449 491 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 TADA2AO75478 443 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 CHRNA1P02708 482 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 IQCF3P0C7M6 154 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 CKBP12277 381 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 UNGP13051 313 aaPredicted RBP5.33□□□□□ -1.56
USP28-213ENST00000544967 SELPP16109 830 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 PRKCHP24723 683 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 CCNCP24863 283 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 YWHABP31946 246 aaKnown RBP5.33□□□□□ -1.56
USP28-213ENST00000544967 MAGEA6P43360 314 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 RXRGP48443 463 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 AQP5P55064 265 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 CYP4A11Q02928 519 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 CHRNEQ04844 493 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 FAM109BQ6ICB4 259 aaPredicted RBP5.33□□□□□ -1.56
USP28-213ENST00000544967 C4orf22Q6V702 233 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 BTN2A1Q7KYR7 527 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 PGAM4Q8N0Y7 254 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 ANKFN1Q8N957 763 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 OR7G1Q8NGA0 311 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 OR8H1Q8NGG4 311 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 SLC35B2Q8TB61 432 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 DDX1Q92499 740 aaKnown RBP5.33□□□□□ -1.56
USP28-213ENST00000544967 ATP6V1E2Q96A05 226 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 MOGAT1Q96PD6 335 aa5.33□□□□□ -1.56
USP28-213ENST00000544967 TMEM134Q9H6X4 195 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms