RNA–Protein interactions for RNA: ENST00000544866.5

PDCD2-213, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-213ENST00000544866 FAM131CQ96AQ9 280 aa17.12■□□□□ 0.33
PDCD2-213ENST00000544866 LOXL4Q96JB6 756 aa17.12■□□□□ 0.33
PDCD2-213ENST00000544866 FBXL12Q9NXK8 326 aa17.12■□□□□ 0.33
PDCD2-213ENST00000544866 LHX3Q9UBR4 397 aa17.12■□□□□ 0.33
PDCD2-213ENST00000544866 IPO11Q9UI26 975 aaKnown RBP17.12■□□□□ 0.33
PDCD2-213ENST00000544866 A0A1W2PP55 124 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 MACROD2A1Z1Q3 448 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 PEX11BO96011 259 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 RETP07949 1114 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 ACSL1P33121 698 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 RECQLP46063 649 aaPredicted RBP17.11■□□□□ 0.33
PDCD2-213ENST00000544866 IL10RBQ08334 325 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 SPDYCQ5MJ68 293 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 ATXN7L2Q5T6C5 722 aaPredicted RBP17.11■□□□□ 0.33
PDCD2-213ENST00000544866 SLC9A4Q6AI14 798 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 LPCAT2Q7L5N7 544 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 SLC41A1Q8IVJ1 513 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 KATNAL2Q8IYT4 538 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 PLD5Q8N7P1 536 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 OR2AP1Q8NGE2 309 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 RNF25Q96BH1 459 aaPredicted RBP17.11■□□□□ 0.33
PDCD2-213ENST00000544866 PDLIM2Q96JY6 352 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 HEPHQ9BQS7 1158 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 GPR174Q9BXC1 333 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 SP110Q9HB58 689 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 HECAQ9UBI9 543 aaPredicted RBP17.11■□□□□ 0.33
PDCD2-213ENST00000544866 IL36AQ9UHA7 158 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 FZD4Q9ULV1 537 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 FARP1Q9Y4F1 1045 aaPredicted RBP17.11■□□□□ 0.33
PDCD2-213ENST00000544866 CEP250Q9BV73 2442 aa17.11■□□□□ 0.33
PDCD2-213ENST00000544866 C1QTNF3-AMACRE9PGA6 284 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 PLK4O00444 970 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 MAFKO60675 156 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 NDUFS2O75306 463 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 LEFTY1O75610 366 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 PRNPP04156 253 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 CTNNA1P35221 906 aaKnown RBP17.1■□□□□ 0.33
PDCD2-213ENST00000544866 CDKN2BP42772 138 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 PTGER3P43115 390 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 DHPSP49366 369 aaPredicted RBP17.1■□□□□ 0.33
PDCD2-213ENST00000544866 RHOAP61586 193 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 SNRPD1P62314 119 aaKnown RBP17.1■□□□□ 0.33
PDCD2-213ENST00000544866 GBE1Q04446 702 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 GALNT2Q10471 571 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 SFSWAPQ12872 951 aaKnown RBP17.1■□□□□ 0.33
PDCD2-213ENST00000544866 SLC10A2Q12908 348 aaPredicted RBP17.1■□□□□ 0.33
PDCD2-213ENST00000544866 IFI16Q16666 785 aaKnown RBP17.1■□□□□ 0.33
PDCD2-213ENST00000544866 ARSIQ5FYB1 569 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 FAM46CQ5VWP2 391 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 HDDC3Q8N4P3 179 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 DCLK2Q8N568 766 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 ATPAF2Q8N5M1 289 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 DEFB119Q8N690 84 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 KIAA1524Q8TCG1 905 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 GRIN3AQ8TCU5 1115 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 RUBCNQ92622 972 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 ARRDC3Q96B67 414 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 ZNF599Q96NL3 588 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 BTBD1Q9H0C5 482 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 NEUROG2Q9H2A3 272 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 ZDHHC6Q9H6R6 413 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 NCDNQ9UBB6 729 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 GMEB2Q9UKD1 530 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 NCKAP1Q9Y2A7 1128 aa17.1■□□□□ 0.33
PDCD2-213ENST00000544866 C10orf142B7Z368 130 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 PALMO75781 387 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 RNASEH2AO75792 299 aaKnown RBP17.09■□□□□ 0.33
PDCD2-213ENST00000544866 MAP3K6O95382 1288 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 IGSF6O95976 241 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 CTNNA2P26232 953 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 GKP32189 559 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 CNTN1Q12860 1018 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 MYLK3Q32MK0 819 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 POM121L1PQ3SYA9 428 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 AGBL4Q5VU57 503 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 SPOCD1Q6ZMY3 1216 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 ARMCX6Q7L4S7 300 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 NT5DC3Q86UY8 548 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 ALYREFQ86V81 257 aaKnown RBP17.09■□□□□ 0.33
PDCD2-213ENST00000544866 LRRC49Q8IUZ0 686 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 RNF10Q8N5U6 811 aaKnown RBP17.09■□□□□ 0.33
PDCD2-213ENST00000544866 OR6K2Q8NGY2 324 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 GANCQ8TET4 914 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 ZNF419Q96HQ0 510 aaPredicted RBP17.09■□□□□ 0.33
PDCD2-213ENST00000544866 EXOC2Q96KP1 924 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 GDAP1L1Q96MZ0 367 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 OMDQ99983 421 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 TSGA10Q9BZW7 698 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 ARRDC1-AS1Q9H2J1 176 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 SGK2Q9HBY8 427 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 DTLQ9NZJ0 730 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 PCDHA3Q9Y5H8 950 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 CAPN6Q9Y6Q1 641 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 PLXNA2O75051 1894 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 KNL1Q8NG31 2342 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 SPTBN4Q9H254 2564 aa17.09■□□□□ 0.33
PDCD2-213ENST00000544866 BCLAF3A2AJT9 711 aaKnown RBP17.08■□□□□ 0.32
PDCD2-213ENST00000544866 KPNA3O00505 521 aaPredicted RBP17.08■□□□□ 0.32
PDCD2-213ENST00000544866 POP4O95707 220 aaKnown RBP17.08■□□□□ 0.32
PDCD2-213ENST00000544866 SEMA4FO95754 770 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms