RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 GALNTL5Q7Z4T8 443 aa20.26■□□□□ 0.83
BPTF-208ENST00000544778 CAMK1DQ8IU85 385 aa20.26■□□□□ 0.83
BPTF-208ENST00000544778 HOMEZQ8IX15 550 aa20.26■□□□□ 0.83
BPTF-208ENST00000544778 TCP10LQ8TDR4 215 aa20.26■□□□□ 0.83
BPTF-208ENST00000544778 ERGIC2Q96RQ1 377 aa20.26■□□□□ 0.83
BPTF-208ENST00000544778 NAALADL1Q9UQQ1 740 aa20.26■□□□□ 0.83
BPTF-208ENST00000544778 METTL7BQ6UX53 244 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 GCNT7Q6ZNI0 430 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 MARCH2Q9P0N8 246 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 MRPS23Q9Y3D9 190 aaKnown RBP20.25■□□□□ 0.83
BPTF-208ENST00000544778 TOP3BO95985 862 aaKnown RBP20.25■□□□□ 0.83
BPTF-208ENST00000544778 CACNA2D1P54289 1103 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 PRKAA2P54646 552 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 IRF8Q02556 426 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 TBX2Q13207 712 aaPredicted RBP20.25■□□□□ 0.83
BPTF-208ENST00000544778 MPPE1Q53F39 396 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 INTS11Q5TA45 600 aaKnown RBP20.25■□□□□ 0.83
BPTF-208ENST00000544778 UBE2E3Q969T4 207 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 ASAH2Q9NR71 780 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 DNMT3LQ9UJW3 386 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 USP12O75317 370 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 UGT1A5P35504 534 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 SPIBQ01892 262 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 NBPF12Q5TAG4 269 aaPredicted RBP20.25■□□□□ 0.83
BPTF-208ENST00000544778 HIPK1Q86Z02 1210 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 PLA2G12BQ9BX93 195 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 DCXO43602 365 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 TRMT5Q32P41 509 aaKnown RBP20.25■□□□□ 0.83
BPTF-208ENST00000544778 PARP8Q8N3A8 854 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 NRG3P56975 720 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 ATP13A4Q4VNC1 1196 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 TXNRD3Q86VQ6 643 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 ZDHHC17Q8IUH5 632 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 SETD6Q8TBK2 473 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 ACTL9Q8TC94 416 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 SLC9A3R1O14745 358 aaPredicted RBP20.25■□□□□ 0.83
BPTF-208ENST00000544778 CATP04040 527 aaKnown RBP20.25■□□□□ 0.83
BPTF-208ENST00000544778 BEX3Q00994 111 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 TTC7BQ86TV6 843 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 DEFB106AQ8N104 65 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 ADAM2Q99965 735 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 MLPHQ9BV36 600 aaPredicted RBP20.25■□□□□ 0.83
BPTF-208ENST00000544778 GULP1Q9UBP9 304 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 CDH9Q9ULB4 789 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 PSMD13Q9UNM6 376 aa20.25■□□□□ 0.83
BPTF-208ENST00000544778 UBOX5O94941 541 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 PSEN2P49810 448 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 PKNOX1P55347 436 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 SPIRE1Q08AE8 756 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 ARMCX1Q9P291 453 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 PPP2R3BQ9Y5P8 575 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 SLC28A2O43868 658 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 HOXC12P31275 282 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 PABPC1LQ4VXU2 614 aaKnown RBP20.24■□□□□ 0.83
BPTF-208ENST00000544778 RAP1GAP2Q684P5 730 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 SLC27A1Q6PCB7 646 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 C8orf59Q8N0T1 100 aaPredicted RBP20.24■□□□□ 0.83
BPTF-208ENST00000544778 TRAPPC12Q8WVT3 735 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 ABCC13Q9NSE7 274 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 TRPV2Q9Y5S1 764 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 FCHO1O14526 889 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 TNFAIP8O95379 198 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 RNASE12Q5GAN4 147 aaKnown RBP20.24■□□□□ 0.83
BPTF-208ENST00000544778 TSHZ1Q6ZSZ6 1077 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 VIL1P09327 827 aaKnown RBP20.24■□□□□ 0.83
BPTF-208ENST00000544778 PTPN5P54829 565 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 SNX32Q86XE0 403 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 PHF10Q8WUB8 498 aaKnown RBP20.24■□□□□ 0.83
BPTF-208ENST00000544778 LMAN2LQ9H0V9 348 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 GIT1Q9Y2X7 761 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 ZBTB22O15209 634 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 ZIK1Q3SY52 487 aaPredicted RBP20.24■□□□□ 0.83
BPTF-208ENST00000544778 MYLPFQ96A32 169 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 PCDH9Q9HC56 1237 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 TPP1O14773 563 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 PDX1P52945 283 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 OR4A15Q8NGL6 344 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 BTBD10Q9BSF8 475 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 TM6SF2Q9BZW4 377 aa20.24■□□□□ 0.83
BPTF-208ENST00000544778 GCATO75600 419 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 USP46P62068 366 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 FCHO2Q0JRZ9 810 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 BHLHB9Q6PI77 547 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.23■□□□□ 0.83
BPTF-208ENST00000544778 OXNAD1Q96HP4 312 aaPredicted RBP20.23■□□□□ 0.83
BPTF-208ENST00000544778 FNDC11Q9BVV2 318 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 HECW2Q9P2P5 1572 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 TMEM199Q8N511 208 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 MYCBPAPQ8TBZ2 947 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 TEX47Q8TBZ9 253 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 APBB2Q92870 758 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 QKIQ96PU8 341 aaKnown RBP eCLIP20.23■□□□□ 0.838e-11■■■■■ 27.5
BPTF-208ENST00000544778 MROH7Q68CQ1 1323 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 FAM86B1E9PN63 330 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 AKR1A1P14550 325 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 APTXQ7Z2E3 356 aaKnown RBP20.23■□□□□ 0.83
BPTF-208ENST00000544778 CCDC54Q8NEL0 328 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 Q96MT0 163 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 GPR75-ASB3A0A0A6YYF3 556 aa20.23■□□□□ 0.83
BPTF-208ENST00000544778 ERAL1O75616 437 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms