RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 ZNF460Q14592 562 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 CARTPTQ16568 116 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 GPR107Q5VW38 600 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 PMF1Q6P1K2 205 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 SLC27A1Q6PCB7 646 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 NECAB2Q7Z6G3 386 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 PLEKHH3Q7Z736 793 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 DDX53Q86TM3 631 aaKnown RBP13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 CACUL1Q86Y37 369 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 WNT8BQ93098 351 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 BORCS6Q96GS4 357 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 TWNKQ96RR1 684 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 ZNF556Q9HAH1 456 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 ZFP14Q9HCL3 533 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 BPIFA1Q9NP55 256 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 STXBP5LQ9Y2K9 1186 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 SNX10Q9Y5X0 201 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 ASCC3Q8N3C0 2202 aaKnown RBP13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 RRN3P2A6NIE6 340 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 AMHP03971 560 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 ZNF280AP59817 542 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 CDC16Q13042 620 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 MAPRE1Q15691 268 aaKnown RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 PARP6Q2NL67 630 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 SYTL3Q4VX76 610 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 LMO3Q8TAP4 145 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 ELOVL4Q9GZR5 314 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 USE1Q9NZ43 259 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 ZNHIT2Q9UHR6 403 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 RABGEF1Q9UJ41 708 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 C17orf102A2RUQ5 167 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 TK2O00142 265 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 LYNP07948 512 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 CCDC159P0C7I6 412 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 ODC1P11926 461 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 EPB42P16452 691 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 PIK3R1P27986 724 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 SCNN1GP51170 649 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 NUP107P57740 925 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 ZNF177Q13360 481 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 TMEM198Q66K66 360 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 NET1Q7Z628 596 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 CENPLQ8N0S6 344 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 ZCCHC7Q8N3Z6 543 aaKnown RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 CARNMT1Q8N4J0 409 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 PTGR2Q8N8N7 351 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 FAM47BQ8NA70 645 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 FAM120BQ96EK7 910 aaKnown RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 ZFYVE19Q96K21 471 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 TRIM62Q9BVG3 475 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 NOL11Q9H8H0 719 aaKnown RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 TMEM216Q9P0N5 145 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 TUBGCP4Q9UGJ1 667 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 DAPK2Q9UIK4 370 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 SLCO1B7G3V0H7 640 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 CXCL11O14625 94 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 TMCC1O94876 653 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 CCNFP41002 786 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 CD86P42081 329 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 NPY2RP49146 381 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 EIF2B2P49770 351 aaKnown RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 SLC16A1P53985 500 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 OTOP3Q7RTS5 596 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 TAS1R3Q7RTX0 852 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 ELMO1Q92556 727 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 C6orf62Q9GZU0 229 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 PARVBQ9HBI1 364 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 VPS28Q9UK41 221 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 HBS1LQ9Y450 684 aaKnown RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 RGSL1A5PLK6 1076 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 SERPINA6P08185 405 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 CDH2P19022 906 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 HALP42357 657 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 PIK3CGP48736 1102 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 NR2C2P49116 596 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 MADCAM1Q13477 382 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 ACVR2BQ13705 512 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 TRIM25Q14258 630 aaKnown RBP13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 ANKS6Q68DC2 871 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 LRRC8BQ6P9F7 803 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 BPIFB6Q8NFQ5 453 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 SPATA22Q8NHS9 363 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 SPPL2AQ8TCT8 520 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 ESAMQ96AP7 390 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 RBBP8Q99708 897 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 GPR88Q9GZN0 384 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 POPDC2Q9HBU9 364 aa13.09□□□□□ -0.31
TUBGCP2-210ENST00000543663 ARID1BQ8NFD5 2236 aaPredicted RBP13.08□□□□□ -0.31
TUBGCP2-210ENST00000543663 C15orf38-AP3S2A0A0A6YYH1 394 aa13.08□□□□□ -0.32
TUBGCP2-210ENST00000543663 RAMP2O60895 175 aa13.08□□□□□ -0.32
TUBGCP2-210ENST00000543663 SIN3BO75182 1162 aa13.08□□□□□ -0.32
TUBGCP2-210ENST00000543663 MPOP05164 745 aa13.08□□□□□ -0.32
TUBGCP2-210ENST00000543663 CKMP06732 381 aa13.08□□□□□ -0.32
TUBGCP2-210ENST00000543663 PTPN1P18031 435 aaKnown RBP13.08□□□□□ -0.32
TUBGCP2-210ENST00000543663 KLF10Q13118 480 aa13.08□□□□□ -0.32
TUBGCP2-210ENST00000543663 AP5B1Q2VPB7 878 aa13.08□□□□□ -0.32
TUBGCP2-210ENST00000543663 CTXN3Q4LDR2 81 aa13.08□□□□□ -0.32
TUBGCP2-210ENST00000543663 SPANXN3Q5MJ09 141 aa13.08□□□□□ -0.32
TUBGCP2-210ENST00000543663 LDLRAP1Q5SW96 308 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms