RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 RNASEH2BQ5TBB1 312 aaKnown RBP11.73□□□□□ -0.53
COPS7A-217ENST00000543537 Q6ZNB5 142 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 ARHGEF18Q6ZSZ5 1173 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 SCD5Q86SK9 330 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 RASSF3Q86WH2 238 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 CCDC185Q8N715 623 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 FAM76AQ8TAV0 307 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 HTR3CQ8WXA8 447 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 TBC1D31Q96DN5 1066 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 OLFM3Q96PB7 478 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 ZIM3Q96PE6 472 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 KCTD15Q96SI1 283 aaPredicted RBP11.73□□□□□ -0.53
COPS7A-217ENST00000543537 RBM15Q96T37 977 aaKnown RBP eCLIP11.73□□□□□ -0.53
COPS7A-217ENST00000543537 HERPUD2Q9BSE4 406 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 CNOT10Q9H9A5 744 aaKnown RBP11.73□□□□□ -0.53
COPS7A-217ENST00000543537 NMUR1Q9HB89 426 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 USP29Q9HBJ7 922 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 PARD6AQ9NPB6 346 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 SPHK2Q9NRA0 654 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 FAM153AQ9UHL3 310 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 DNMT3LQ9UJW3 386 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 MMP17Q9ULZ9 603 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 PLAAQ9Y263 795 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 SH3BP1Q9Y3L3 701 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 FARP1Q9Y4F1 1045 aaPredicted RBP11.73□□□□□ -0.53
COPS7A-217ENST00000543537 MYO16Q9Y6X6 1858 aa11.73□□□□□ -0.53
COPS7A-217ENST00000543537 SDK1Q7Z5N4 2213 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 A0A087WUV0 522 aaPredicted RBP11.72□□□□□ -0.53
COPS7A-217ENST00000543537 MAGEB16A2A368 324 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 SRRM3A6NNA2 597 aaPredicted RBP11.72□□□□□ -0.53
COPS7A-217ENST00000543537 DCLK1O15075 740 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 AXIN1O15169 862 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 KCNN4O15554 427 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 CREB3O43889 395 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 RPP40O75818 363 aaKnown RBP11.72□□□□□ -0.53
COPS7A-217ENST00000543537 KAT7O95251 611 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 TBX18O95935 607 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 AGTP01019 485 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 GOT1P17174 413 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 ERCC2P18074 760 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 CCNCP24863 283 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 EPHB2P29323 1055 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 OAS2P29728 719 aaKnown RBP11.72□□□□□ -0.53
COPS7A-217ENST00000543537 RPL22P35268 128 aaKnown RBP11.72□□□□□ -0.53
COPS7A-217ENST00000543537 MAGEA4P43358 317 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 KIR2DL1P43626 348 aaPredicted RBP11.72□□□□□ -0.53
COPS7A-217ENST00000543537 SLC11A2P49281 568 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 NDST2P52849 883 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 MRPS25P82663 173 aaKnown RBP11.72□□□□□ -0.53
COPS7A-217ENST00000543537 MESP2Q0VG99 397 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 SRSF5Q13243 272 aaKnown RBP11.72□□□□□ -0.53
COPS7A-217ENST00000543537 PRPSAP1Q14558 356 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 CSRP2Q16527 193 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 CEP85LQ5SZL2 805 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 CYS1Q717R9 158 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 TAC4Q86UU9 113 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 C12orf40Q86WS4 652 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 BBS7Q8IWZ6 715 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 FAM160A2Q8N612 972 aaPredicted RBP11.72□□□□□ -0.53
COPS7A-217ENST00000543537 FAM71DQ8N9W8 422 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 TTC16Q8NEE8 873 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 WBP2Q969T9 261 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 HDAC11Q96DB2 347 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 SLC39A13Q96H72 371 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 ATP6V1G3Q96LB4 118 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 SPATA13Q96N96 652 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 DTLQ9NZJ0 730 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 SENP1Q9P0U3 644 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 STARD13Q9Y3M8 1113 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 PCDHGA5Q9Y5G8 931 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 MYOFQ9NZM1 2061 aa11.72□□□□□ -0.53
COPS7A-217ENST00000543537 A0A1W2PQH9 124 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 E7ESA3 106 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 E7EVH7 732 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 RASGRF2O14827 1237 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 RIPK2O43353 540 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 CACNG3O60359 315 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 CDH16O75309 829 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 APODP05090 189 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 RHOQP17081 205 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 AMPD1P23109 780 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 ETFBP38117 255 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 SLC6A11P48066 632 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 HARS2P49590 506 aaKnown RBP11.71□□□□□ -0.53
COPS7A-217ENST00000543537 DGKEP52429 567 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 YBEYP58557 167 aaPredicted RBP11.71□□□□□ -0.53
COPS7A-217ENST00000543537 PPIDQ08752 370 aaKnown RBP11.71□□□□□ -0.53
COPS7A-217ENST00000543537 GALNT2Q10471 571 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 MMRN1Q13201 1228 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 PRKD1Q15139 912 aaPredicted RBP11.71□□□□□ -0.53
COPS7A-217ENST00000543537 CRY1Q16526 586 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 LGSNQ5TDP6 509 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 TTC39BQ5VTQ0 682 aaPredicted RBP11.71□□□□□ -0.53
COPS7A-217ENST00000543537 OTUD1Q5VV17 481 aaPredicted RBP11.71□□□□□ -0.53
COPS7A-217ENST00000543537 NCBP2-AS2Q69YL0 99 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 ZNF449Q6P9G9 518 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 PRR23BQ6ZRT6 265 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 C11orf74Q86VG3 221 aa11.71□□□□□ -0.53
COPS7A-217ENST00000543537 ZC3H18Q86VM9 953 aaKnown RBP11.71□□□□□ -0.53
COPS7A-217ENST00000543537 TMEM25Q86YD3 366 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms