RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PHF21BQ96EK2 531 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ACBD6Q9BR61 282 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ZNF670Q9BS34 389 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 UNKQ9C0B0 810 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 LRFN1Q9P244 771 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 SOX13Q9UN79 622 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 MON2Q7Z3U7 1717 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 IGLV3-22A0A075B6J6 115 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 SLCO1B7G3V0H7 640 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 MPOP05164 745 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ELFN1P0C7U0 828 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CES1P23141 567 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CORO1AP31146 461 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CENPAP49450 140 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 SLC5A3P53794 718 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ZNF618Q5T7W0 954 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 GRTP1Q5TC63 336 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CES3Q6UWW8 571 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 AMIGO3Q86WK7 504 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 EPS8L3Q8TE67 593 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ANKRD49Q8WVL7 239 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 NRDE2Q9H7Z3 1164 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ZFP14Q9HCL3 533 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CLDND1Q9NY35 253 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 TRPC4Q9UBN4 977 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 NDRG2Q9UN36 371 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CRYL1Q9Y2S2 319 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 TSC22D4Q9Y3Q8 395 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 KANSL1LA0AUZ9 987 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CFAP73A6NFT4 308 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 KPNA5O15131 536 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 C1RP00736 705 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 PECAM1P16284 738 aaPredicted RBP6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CCNCP24863 283 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 PSMB4P28070 264 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 PPP2R1BP30154 601 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 AIF1P55008 147 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 HSD17B7P56937 341 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 IL2P60568 153 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 GRM3Q14832 879 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 PGS1Q32NB8 556 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CNKSR3Q6P9H4 555 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 TADA1Q96BN2 335 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 RNF157Q96PX1 679 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 RPS6KB2Q9UBS0 482 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 LTN1O94822 1766 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 PRSS47A8MTI9 375 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 OPLAHO14841 1288 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 HNRNPRO43390 633 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 PAGE1O75459 146 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 RASSF9O75901 435 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 C22orf31O95567 290 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 EPHX1P07099 455 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 GOT1P17174 413 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 NFKB1P19838 968 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 HLA-DPA1P20036 260 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 TRIM32Q13049 653 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 GFOD2Q3B7J2 385 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 PAGE2BQ5JRK9 111 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 PCID2Q5JVF3 399 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CHMP1BQ7LBR1 199 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 COLGALT2Q8IYK4 626 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CATSPER1Q8NEC5 780 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 FAM84AQ96KN4 292 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 DEPDC7Q96QD5 511 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CPNE1Q99829 537 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 FAM126AQ9BYI3 521 aaPredicted RBP6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 SH3BP4Q9P0V3 963 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 NAALADL1Q9UQQ1 740 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CICQ96RK0 1608 aaPredicted RBP6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 PTPRJQ12913 1337 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 BUD23O43709 281 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CPSF4O95639 269 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 CLUP10909 449 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 RPL17P18621 184 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ERFP50548 548 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 NEK2P51955 445 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 LILRA4P59901 499 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ERVK-21P61565 698 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 FMO1Q01740 532 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ARHGAP1Q07960 439 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 COX10Q12887 443 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 GRB14Q14449 540 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 SLC25A52Q3SY17 297 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ATP6AP1LQ52LC2 224 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 SCARA3Q6AZY7 606 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 LCLAT1Q6UWP7 414 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 TMC5Q6UXY8 1006 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 PRPF39Q86UA1 669 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 ZNF555Q8NEP9 628 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 LRRC39Q96DD0 335 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 TXNRD2Q9NNW7 524 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 MPP6Q9NZW5 540 aa6.98□□□□□ -1.29
SRGAP1-206ENST00000543397 A0A096LPK6 155 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 A8MV72 311 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 B2RBV5 119 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 MSI1O43347 362 aaKnown RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 CYP7B1O75881 506 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 SLC35G4P0C7Q5 338 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 WASP42768 502 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms