RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 FRG1Q14331 258 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 SSPNQ14714 243 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 HERC3Q15034 1050 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PTPAQ15257 358 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 TCEA2Q15560 299 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 GPR162Q16538 588 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 CEP55Q53EZ4 464 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 KRBOX4Q5JUW0 171 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PPM1LQ5SGD2 360 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PIK3R6Q5UE93 754 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 EEF1A1P5Q5VTE0 462 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ELP2Q6IA86 826 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 NANOGP8Q6NSW7 305 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 FAM180BQ6P0A1 224 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PLBD1Q6P4A8 553 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 MFSD6Q6ZSS7 791 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 UTS2BQ765I0 119 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 OTOP3Q7RTS5 596 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 HEATR3Q7Z4Q2 680 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 KIAA0907Q7Z7F0 614 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 SETD3Q86TU7 594 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 TLK2Q86UE8 772 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 CDH24Q86UP0 819 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 COMTD1Q86VU5 262 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 CLEC10AQ8IUN9 316 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 P3H2Q8IVL5 708 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 BBS7Q8IWZ6 715 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 KBTBD2Q8IY47 623 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 C16orf71Q8IYS4 520 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ANKRD35Q8N283 1001 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 DPP10Q8N608 796 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 TOP6BLQ8N6T0 577 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 MARCH10Q8NA82 808 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 FNDC5Q8NAU1 212 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 SLC17A8Q8NDX2 589 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PPHLN1Q8NEY8 458 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 OR7D4Q8NG98 312 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 OR5T2Q8NGG2 359 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 RIN3Q8TB24 985 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 TBC1D15Q8TC07 691 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PNPT1Q8TCS8 783 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 BLOC1S5Q8TDH9 187 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ACTRT2Q8TDY3 377 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PPP4R1Q8TF05 950 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 CAPSLQ8WWF8 208 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 WASF1Q92558 559 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 MAP4K1Q92918 833 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 RILPL2Q969X0 211 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ZUFSPQ96AP4 578 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 RAD51AP1Q96B01 352 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 DACT3Q96B18 629 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 C18orf8Q96DM3 657 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 AK8Q96MA6 479 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 TGS1Q96RS0 853 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 CDK5RAP1Q96SZ6 601 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 FMO2Q99518 471 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 DDX50Q9BQ39 737 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 FAM83CQ9BQN1 747 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 CCDC106Q9BWC9 280 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 TEX13BQ9BXU2 312 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PACSIN1Q9BY11 444 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 CADM1Q9BY67 442 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 YTHDF1Q9BYJ9 559 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 OSBPL8Q9BZF1 889 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ZMYND12Q9H0C1 365 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PPA2Q9H2U2 334 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 RNF41Q9H4P4 317 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 EBF3Q9H4W6 596 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ELAC1Q9H777 363 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 KANSL2Q9H9L4 492 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 SIAEQ9HAT2 523 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PRDM8Q9NQV8 689 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ANLNQ9NQW6 1124 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 C1GALT1Q9NS00 363 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 RBM12Q9NTZ6 932 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 C20orf96Q9NUD7 363 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 GIMAP4Q9NUV9 329 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 FAM86C1Q9NVL1 165 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ASNSD1Q9NWL6 643 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 KCND2Q9NZV8 630 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 LRP2BPQ9P2M1 347 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 CD300AQ9UGN4 299 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 SUSD2Q9UGT4 822 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ADGRE2Q9UHX3 823 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 DAPK2Q9UIK4 370 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ZFP69BQ9UJL9 534 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 HAO1Q9UJM8 370 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 DBNLQ9UJU6 430 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 BAG5Q9UL15 447 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 INVSQ9Y283 1065 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 MTO1Q9Y2Z2 717 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 DERAQ9Y315 318 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 UGT2A1Q9Y4X1 527 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 COL4A3BPQ9Y5P4 624 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 KCNE2Q9Y6J6 123 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PMF1-BGLAPU3KQ54 211 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 CACNA1FO60840 1977 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 MYH7P12883 1935 aa4.4□□□□□ -1.7
SNHG1-219ENST00000542112 COL18A1P39060 1754 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms