RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 ULBP1Q9BZM6 244 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 XPO4Q9C0E2 1151 aaKnown RBP10.01□□□□□ -0.81
CHFR-220ENST00000541817 CLPBQ9H078 707 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 LRRN3Q9H3W5 708 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 CUEDC1Q9NWM3 386 aaPredicted RBP10.01□□□□□ -0.81
CHFR-220ENST00000541817 SERTAD1Q9UHV2 236 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 STOML2Q9UJZ1 356 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 KCND3Q9UK17 655 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 UNC13CQ8NB66 2214 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 EFCAB7A8K855 629 aa10□□□□□ -0.81
CHFR-220ENST00000541817 TMX2-CTNND1H3BSU7 103 aa10□□□□□ -0.81
CHFR-220ENST00000541817 TPP1O14773 563 aa10□□□□□ -0.81
CHFR-220ENST00000541817 POLR2DO15514 142 aaKnown RBP10□□□□□ -0.81
CHFR-220ENST00000541817 TUBB4AP04350 444 aa10□□□□□ -0.81
CHFR-220ENST00000541817 ANXA6P08133 673 aa10□□□□□ -0.81
CHFR-220ENST00000541817 GAP43P17677 238 aa10□□□□□ -0.81
CHFR-220ENST00000541817 HOXD13P35453 343 aa10□□□□□ -0.81
CHFR-220ENST00000541817 UBASH3AP57075 661 aa10□□□□□ -0.81
CHFR-220ENST00000541817 CDH18Q13634 790 aa10□□□□□ -0.81
CHFR-220ENST00000541817 NCOA4Q13772 614 aa10□□□□□ -0.81
CHFR-220ENST00000541817 C16orf72Q14CZ0 275 aa10□□□□□ -0.81
CHFR-220ENST00000541817 PHF19Q5T6S3 580 aa10□□□□□ -0.81
CHFR-220ENST00000541817 ESRP1Q6NXG1 681 aaKnown RBP10□□□□□ -0.81
CHFR-220ENST00000541817 BHLHA9Q7RTU4 235 aa10□□□□□ -0.81
CHFR-220ENST00000541817 FRS2Q8WU20 508 aa10□□□□□ -0.81
CHFR-220ENST00000541817 OR8D1Q8WZ84 308 aa10□□□□□ -0.81
CHFR-220ENST00000541817 SPAG5Q96R06 1193 aa10□□□□□ -0.81
CHFR-220ENST00000541817 DUSP16Q9BY84 665 aa10□□□□□ -0.81
CHFR-220ENST00000541817 UNKQ9C0B0 810 aaKnown RBP10□□□□□ -0.81
CHFR-220ENST00000541817 SEMA6CQ9H3T2 930 aa10□□□□□ -0.81
CHFR-220ENST00000541817 PRDM8Q9NQV8 689 aa10□□□□□ -0.81
CHFR-220ENST00000541817 KCND1Q9NSA2 647 aa10□□□□□ -0.81
CHFR-220ENST00000541817 SPASTQ9UBP0 616 aa10□□□□□ -0.81
CHFR-220ENST00000541817 APOBEC3BQ9UH17 382 aaKnown RBP10□□□□□ -0.81
CHFR-220ENST00000541817 GGT7Q9UJ14 662 aa10□□□□□ -0.81
CHFR-220ENST00000541817 PPM1HQ9ULR3 514 aa10□□□□□ -0.81
CHFR-220ENST00000541817 HBS1LQ9Y450 684 aaKnown RBP10□□□□□ -0.81
CHFR-220ENST00000541817 PDZD2O15018 2839 aa10□□□□□ -0.81
CHFR-220ENST00000541817 TRPM6Q9BX84 2022 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 ZNF891A8MT65 544 aaPredicted RBP9.99□□□□□ -0.81
CHFR-220ENST00000541817 STMND1H3BQB6 276 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 TULP2O00295 520 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 RIOK3O14730 519 aaKnown RBP9.99□□□□□ -0.81
CHFR-220ENST00000541817 ACSL4O60488 711 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 DDAH2O95865 285 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 SLFN14P0C7P3 912 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 TSHRP16473 764 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 CD58P19256 250 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 CDK11BP21127 795 aaKnown RBP9.99□□□□□ -0.81
CHFR-220ENST00000541817 ATP1A2P50993 1020 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 TKTL1P51854 596 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 CCZ1BP86790 482 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 CCZ1P86791 482 aaPredicted RBP9.99□□□□□ -0.81
CHFR-220ENST00000541817 ZFP36L1Q07352 338 aaKnown RBP9.99□□□□□ -0.81
CHFR-220ENST00000541817 ZNF394Q53GI3 561 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 FAM46CQ5VWP2 391 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 CEP135Q66GS9 1140 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 C16orf46Q6P387 395 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 Q6ZVU0 165 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 UNC5BQ8IZJ1 945 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 CACNA2D3Q8IZS8 1091 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 KDM1BQ8NB78 822 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 CCDC112Q8NEF3 446 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 RNF139Q8WU17 664 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 APOBEC4Q8WW27 367 aaKnown RBP9.99□□□□□ -0.81
CHFR-220ENST00000541817 MARVELD3Q96A59 401 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 EPSTI1Q96J88 318 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 AK8Q96MA6 479 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 C16orf45Q96MC5 204 aaPredicted RBP9.99□□□□□ -0.81
CHFR-220ENST00000541817 CATSPER2Q96P56 530 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 LRRC61Q9BV99 259 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 NUCKS1Q9H1E3 243 aaKnown RBP9.99□□□□□ -0.81
CHFR-220ENST00000541817 PNPLA8Q9NP80 782 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 GPR27Q9NS67 375 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 PANK4Q9NVE7 773 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 DKK3Q9UBP4 350 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 ERRFI1Q9UJM3 462 aaPredicted RBP9.99□□□□□ -0.81
CHFR-220ENST00000541817 MAN1B1Q9UKM7 699 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 RNF215Q9Y6U7 377 aa9.99□□□□□ -0.81
CHFR-220ENST00000541817 SHANK1Q9Y566 2161 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 MED13LQ71F56 2210 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 C1QTNF3-AMACRE9PGA6 284 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 KPNA3O00505 521 aaPredicted RBP9.98□□□□□ -0.81
CHFR-220ENST00000541817 KIAA0391O15091 583 aaKnown RBP9.98□□□□□ -0.81
CHFR-220ENST00000541817 MOCS3O95396 460 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 C4BPAP04003 597 aaKnown RBP9.98□□□□□ -0.81
CHFR-220ENST00000541817 PDGFAP04085 211 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 CTSLP07711 333 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 PDGFRAP16234 1089 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 UGT1A3P35503 534 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 CDC20Q12834 499 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 SYCP1Q15431 976 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 ARHGAP44Q17R89 818 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 PRR30Q53SZ7 412 aaPredicted RBP9.98□□□□□ -0.81
CHFR-220ENST00000541817 MPP7Q5T2T1 576 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 FAXCQ5TGI0 409 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 ARL6IP4Q66PJ3 421 aaKnown RBP9.98□□□□□ -0.81
CHFR-220ENST00000541817 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 ASB18Q6ZVZ8 466 aa9.98□□□□□ -0.81
CHFR-220ENST00000541817 PIGZQ86VD9 579 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms