RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 EPHA8P29322 1005 aaPredicted RBP8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 CD70P32970 193 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 MAGEA1P43355 309 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 SGSHP51688 502 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 AIF1P55008 147 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 HDAC4P56524 1084 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 DAB2P98082 770 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 ATP11AP98196 1134 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 OGDHQ02218 1023 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 SFSWAPQ12872 951 aaKnown RBP8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 LY6DQ14210 128 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 TCEAL1Q15170 157 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 SPA17Q15506 151 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 C15orf59Q2T9L4 293 aaPredicted RBP8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 TBC1D25Q3MII6 688 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 FAM133BQ5BKY9 247 aaKnown RBP8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 MPP7Q5T2T1 576 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 RAD9BQ6WBX8 426 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 ADIPOR2Q86V24 386 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 MMAAQ8IVH4 418 aaKnown RBP8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 RHOT2Q8IXI1 618 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 NIPA2Q8N8Q9 360 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 ZNF248Q8NDW4 579 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 CCDC112Q8NEF3 446 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 OR14C36Q8NHC7 312 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 FAM172AQ8WUF8 416 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 RFFLQ8WZ73 363 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 RNF34Q969K3 372 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 ARHGEF26Q96DR7 871 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 SERAC1Q96JX3 654 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 PDLIM2Q96JY6 352 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 C1orf74Q96LT6 269 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 HAPLN3Q96S86 360 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 NUP85Q9BW27 656 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 PACSIN1Q9BY11 444 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 TKTL2Q9H0I9 626 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 NEUROG2Q9H2A3 272 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 CLMPQ9H6B4 373 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 WDR70Q9NW82 654 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 COX16Q9P0S2 106 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 SERGEFQ9UGK8 458 aa8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 TDRD6O60522 2096 aaKnown RBP8.92□□□□□ -0.98
CLSTN3-212ENST00000541770 A0A0A6YYK5 440 aaPredicted RBP8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 MYO1FO00160 1098 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 TLR4O00206 839 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 ARHGAP6O43182 974 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 RNF8O76064 485 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 MTA2O94776 668 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 MOCS2O96007 188 aaPredicted RBP8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 KRT10P13645 584 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 CKMT2P17540 419 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 ADRA1BP35368 520 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 PCK1P35558 622 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 PSMD8P48556 350 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 PCBP4P57723 403 aaKnown RBP8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 TMPRSS3P57727 454 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 KRT83P78385 493 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 INSM1Q01101 510 aaPredicted RBP8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 RHDQ02161 417 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 NRG1Q02297 640 aaPredicted RBP8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 KCNC4Q03721 635 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 PIGHQ14442 188 aaPredicted RBP8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 CST6Q15828 149 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 CDO1Q16878 200 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 ARL13BQ3SXY8 428 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 MS4A13Q5J8X5 152 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 PIK3R6Q5UE93 754 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 NADSYN1Q6IA69 706 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 RFWD3Q6PCD5 774 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 USP30Q70CQ3 517 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 FAM131BQ86XD5 332 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 MFN1Q8IWA4 741 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 LRRC8AQ8IWT6 810 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 OR2T34Q8NGX1 318 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 ZNF564Q8TBZ8 553 aaPredicted RBP8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 WFDC5Q8TCV5 224 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 TSC1Q92574 1164 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 NTAN1Q96AB6 310 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 PRMT1Q99873 361 aaKnown RBP8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 TRIM7Q9C029 511 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 SEMA4CQ9C0C4 833 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 RSPH9Q9H1X1 276 aaPredicted RBP8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 IP6K2Q9UHH9 426 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 XPO7Q9UIA9 1087 aaKnown RBP8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 ANAPC7Q9UJX3 599 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 SCML1Q9UN30 329 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 PCDHB1Q9Y5F3 818 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 PCDHA13Q9Y5I0 950 aa8.91□□□□□ -0.98
CLSTN3-212ENST00000541770 TBC1D3DA0A087WVF3 549 aa8.9□□□□□ -0.98
CLSTN3-212ENST00000541770 TBC1D3IA0A087WXS9 549 aa8.9□□□□□ -0.98
CLSTN3-212ENST00000541770 TBC1D3EA0A087X179 549 aa8.9□□□□□ -0.98
CLSTN3-212ENST00000541770 TBC1D3KA0A087X1G2 549 aa8.9□□□□□ -0.98
CLSTN3-212ENST00000541770 GOLGA6L7A0A1B0GV03 622 aa8.9□□□□□ -0.98
CLSTN3-212ENST00000541770 A0A1W2PR77 199 aa8.9□□□□□ -0.98
CLSTN3-212ENST00000541770 TYW5A2RUC4 315 aaKnown RBP8.9□□□□□ -0.98
CLSTN3-212ENST00000541770 TBC1D3FA6NER0 549 aaPredicted RBP8.9□□□□□ -0.98
CLSTN3-212ENST00000541770 BTNL10A8MVZ5 291 aa8.9□□□□□ -0.98
CLSTN3-212ENST00000541770 TBC1D3LB9A6J9 549 aa8.9□□□□□ -0.98
CLSTN3-212ENST00000541770 F5H5T6 163 aa8.9□□□□□ -0.98
CLSTN3-212ENST00000541770 I6L893 689 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms