RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 SPINT1O43278 529 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 PLEKP08567 350 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 KRT3P12035 628 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 ATP1A3P13637 1013 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 SDC4P31431 198 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 L1CAMP32004 1257 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 GKP32189 559 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 ACADVLP49748 655 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 CLDN6P56747 220 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 CLDN2P57739 230 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 SETMARQ53H47 684 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 FKBP15Q5T1M5 1219 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 SEL1L3Q68CR1 1132 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 RETSATQ6NUM9 610 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 GCNT7Q6ZNI0 430 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 MON1BQ7L1V2 547 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 ABI3BPQ7Z7G0 1075 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 SLC22A18ASQ8N1D0 253 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 PYROXD2Q8N2H3 581 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 PCDH20Q8N6Y1 951 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 MSANTD4Q8NCY6 345 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 FAM172AQ8WUF8 416 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 NTAN1Q96AB6 310 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 ISG20Q96AZ6 181 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 KLHDC7BQ96G42 594 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 CNDP2Q96KP4 475 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 HEPHQ9BQS7 1158 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 KLC2Q9H0B6 622 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 CCDC86Q9H6F5 360 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 ATP13A1Q9HD20 1204 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 FZD3Q9NPG1 666 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 KLHL11Q9NVR0 708 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 ANO10Q9NW15 660 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 ADAM22Q9P0K1 906 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 FTSJ1Q9UET6 329 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 DNAI1Q9UI46 699 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 FADS3Q9Y5Q0 445 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 NBEAQ8NFP9 2946 aa12.04□□□□□ -0.48
CLSTN3-211ENST00000541667 YKT6O15498 198 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 TEX33O43247 280 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 C1SP09871 688 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 HOXB3P14651 431 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 ITGB7P26010 798 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 MAPKAPK2P49137 400 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 ARRB1P49407 418 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 CCNHP51946 323 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 RPL7AP62424 266 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 MYL5Q02045 173 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 OGDHQ02218 1023 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 UBXN1Q04323 297 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 CYP4F3Q08477 520 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 PROX2Q3B8N5 592 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 SLC45A4Q5BKX6 768 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 FBXL19Q6PCT2 694 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 TMPRSS12Q86WS5 348 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 GALNT15Q8N3T1 639 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 OXR1Q8N573 874 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 C3orf20Q8ND61 904 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 OR13H1Q8NG92 308 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 GRIN3AQ8TCU5 1115 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 CCDC114Q96M63 670 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 KLF6Q99612 283 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 AGPAT1Q99943 283 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 MAGEH1Q9H213 219 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 UCKL1Q9NWZ5 548 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 HECAQ9UBI9 543 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 FARP1Q9Y4F1 1045 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 HS3ST3A1Q9Y663 406 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 CACNA1GO43497 2377 aa12.03□□□□□ -0.48
CLSTN3-211ENST00000541667 ADAMTS20P59510 1910 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 POM121BA6NF01 834 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 KDELR3O43731 214 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 AP1G1O43747 822 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 MAGEC1O60732 1142 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 SDC3O75056 442 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 PAK4O96013 591 aaPredicted RBP12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 THEGLP0DJG4 465 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 ADRB3P13945 408 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 GPD1P21695 349 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 HNRNPA2B1P22626 353 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 DGKAP23743 735 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 ABL2P42684 1182 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 ZNF143P52747 638 aaPredicted RBP12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 C1QBPQ07021 282 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 INAVAQ3KP66 663 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 ARL13BQ3SXY8 428 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 CCDC157Q569K6 752 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 TPRG1LQ5T0D9 272 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 RWDD4Q6NW29 188 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 SASS6Q6UVJ0 657 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 LEKR1Q6ZMV7 388 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 PARS2Q7L3T8 475 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 ARFGAP1Q8N6T3 406 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 NETO2Q8NC67 525 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 NEK11Q8NG66 645 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 MYOCQ99972 504 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 C1QTNF2Q9BXJ5 285 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 SLC17A9Q9BYT1 436 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 TAS2R14Q9NYV8 317 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 TMEM63CQ9P1W3 806 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms