RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 USP20Q9Y2K6 914 aa15.13■□□□□ 0.01
SMARCA4-207ENST00000541122 HAT1O14929 419 aa15.13■□□□□ 0.01
SMARCA4-207ENST00000541122 FARP2O94887 1054 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-207ENST00000541122 CST1P01037 141 aa15.13■□□□□ 0.01
SMARCA4-207ENST00000541122 PRKAR1AP10644 381 aa15.13■□□□□ 0.01
SMARCA4-207ENST00000541122 ITGA2P17301 1181 aa15.13■□□□□ 0.01
SMARCA4-207ENST00000541122 CDH18Q13634 790 aa15.13■□□□□ 0.01
SMARCA4-207ENST00000541122 DNAJC14Q6Y2X3 702 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-207ENST00000541122 ARHGAP36Q6ZRI8 547 aa15.13■□□□□ 0.01
SMARCA4-207ENST00000541122 C12orf56Q8IXR9 622 aa15.13■□□□□ 0.01
SMARCA4-207ENST00000541122 ZFAND2BQ8WV99 257 aa15.13■□□□□ 0.01
SMARCA4-207ENST00000541122 TUBGCP5Q96RT8 1024 aa15.13■□□□□ 0.01
SMARCA4-207ENST00000541122 PACSIN3Q9UKS6 424 aa15.13■□□□□ 0.01
SMARCA4-207ENST00000541122 ANKRD63C9JTQ0 380 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 BTN3A3O00478 584 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 ASS1P00966 412 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 ATXN8OSP0DMR3 200 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 EPHA3P29320 983 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 PRKG2Q13237 762 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 HERC6Q8IVU3 1022 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 OR52K1Q8NGK4 314 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 OR2T34Q8NGX1 318 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 OR2T3Q8NH03 318 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 C17orf50Q8WW18 174 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 HAS1Q92839 578 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 RHOBTB2Q9BYZ6 727 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 TMEM134Q9H6X4 195 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 PNPOQ9NVS9 261 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 PIH1D1Q9NWS0 290 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 ERGIC3Q9Y282 383 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 ATRNO75882 1429 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 DYNC1LI2O43237 492 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 LYPLA1O75608 230 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 FEN1P39748 380 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 CAPZA2P47755 286 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 GSSP48637 474 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 CLCN3P51790 818 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 SLC7A2P52569 658 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 PGM5Q15124 567 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 ZFP69Q49AA0 526 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 SAE1Q9UBE0 346 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 CCDC162PA2VCL2 907 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 E5RJQ4 531 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 TMCC2O75069 709 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 BANF1O75531 89 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 CCNKO75909 580 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 TMEM62Q0P6H9 643 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 STX4Q12846 297 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 BICRALQ6AI39 1079 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 HPS6Q86YV9 775 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 SLC41A1Q8IVJ1 513 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 DEFB106AQ8N104 65 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 ACER1Q8TDN7 264 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 TBCDQ9BTW9 1192 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 SLITRK2Q9H156 845 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 MAN1C1Q9NR34 630 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 OPTCQ9UBM4 332 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 ATP6V1HQ9UI12 483 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 WDR37Q9Y2I8 494 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 NRP2O60462 931 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 UGT2B11O75310 529 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 ZSWIM7Q19AV6 140 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 ZNF284Q2VY69 593 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 CLYBLQ8N0X4 340 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 SIX5Q8N196 739 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 EFCAB3Q8N7B9 438 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 PTGR2Q8N8N7 351 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 CELF6Q96J87 481 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 MECRQ9BV79 373 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 SPACA6W5XKT8 324 aa15.12■□□□□ 0.01
SMARCA4-207ENST00000541122 A0A087WZ62 844 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 ACKR2O00590 384 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 ATP6V1G1O75348 118 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 PCNAP12004 261 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 COL6A2P12110 1019 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 IDH2P48735 452 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 ADIGQ0VDE8 80 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 FGD3Q5JSP0 725 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 CRTC3Q6UUV7 619 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 EIF3MQ7L2H7 374 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 THAP5Q7Z6K1 395 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 ALG9Q9H6U8 611 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 ABI2Q9NYB9 513 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 CLDN25C9JDP6 229 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 TPD52L2O43399 206 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 ACLYP53396 1101 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 HADHBP55084 474 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 LSM3P62310 102 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 MAPKAPK3Q16644 382 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 TXNDC11Q6PKC3 985 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 NPNTQ6UXI9 565 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 DDX53Q86TM3 631 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 HIPK1Q86Z02 1210 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 NKD2Q969F2 451 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 ARMC7Q9H6L4 198 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 SH3BP4Q9P0V3 963 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 COQ6Q9Y2Z9 468 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 SPATA31D1Q6ZQQ2 1576 aa15.11■□□□□ 0.01
SMARCA4-207ENST00000541122 H3BMM5 538 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms