RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 OSGIN2Q9Y236 505 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 OR6C68A6NDL8 312 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 FAM90A20PA6NIJ5 464 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 SLC25A17O43808 307 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 ZNF432O94892 652 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 MMP3P08254 477 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 ARSAP15289 507 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 CD72P21854 359 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 YWHAQP27348 245 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 AMTP48728 403 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 EEF1A2Q05639 463 aaKnown RBP3.87□□□□□ -1.79
MDM2-227ENST00000540709 COASYQ13057 564 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 BYSLQ13895 437 aaKnown RBP3.87□□□□□ -1.79
MDM2-227ENST00000540709 IL13RA2Q14627 380 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 C16orf82Q7Z2V1 217 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 LINS1Q8NG48 757 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 OR6Y1Q8NGX8 325 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 STT3BQ8TCJ2 826 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 HDAC7Q8WUI4 952 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 TMEM18Q96B42 140 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 SLITRK1Q96PX8 696 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 FIZ1Q96SL8 496 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 MPHOSPH6Q99547 160 aaKnown RBP3.87□□□□□ -1.79
MDM2-227ENST00000540709 PAGR1Q9BTK6 254 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 HERC2P3Q9BVR0 1158 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 C1QTNF4Q9BXJ3 329 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 NPFFR1Q9GZQ6 430 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 CXorf56Q9H5V9 222 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 TLR8Q9NR97 1041 aaKnown RBP3.87□□□□□ -1.79
MDM2-227ENST00000540709 MDFICQ9P1T7 246 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 NLKQ9UBE8 527 aa3.87□□□□□ -1.79
MDM2-227ENST00000540709 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.86□□□□□ -1.79
MDM2-227ENST00000540709 GRID2O43424 1007 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 KIF1CO43896 1103 aaKnown RBP3.86□□□□□ -1.79
MDM2-227ENST00000540709 LDB3O75112 727 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 CSF1P09603 554 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 ZNF12P17014 697 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 GNLYP22749 145 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 PNPLA4P41247 253 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 PTPN9P43378 593 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 AARSP49588 968 aaKnown RBP eCLIP3.86□□□□□ -1.79
MDM2-227ENST00000540709 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
MDM2-227ENST00000540709 ERVFC1-1P60608 527 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 GOLGA8FQ08AF8 430 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 GRSF1Q12849 480 aaKnown RBP eCLIP3.86□□□□□ -1.79
MDM2-227ENST00000540709 TRAF3Q13114 568 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 CUL4BQ13620 913 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 CAPSQ13938 189 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 ZNF484Q5JVG2 852 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.86□□□□□ -1.79
MDM2-227ENST00000540709 CUZD1Q86UP6 607 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 ZDHHC23Q8IYP9 409 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 GHDCQ8N2G8 530 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 CTDSP1Q9GZU7 261 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 MALT1Q9UDY8 824 aa3.86□□□□□ -1.79
MDM2-227ENST00000540709 A0A096LPK6 155 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 SMTNL1A8MU46 457 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 IPO5O00410 1097 aaKnown RBP3.85□□□□□ -1.79
MDM2-227ENST00000540709 IGKV3-20P01619 116 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 HTR3AP46098 478 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 KRTAP10-6P60371 365 aaPredicted RBP3.85□□□□□ -1.79
MDM2-227ENST00000540709 SEC61A1P61619 476 aaKnown RBP3.85□□□□□ -1.79
MDM2-227ENST00000540709 CYP4A11Q02928 519 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 DDR1Q08345 913 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 KIF5AQ12840 1032 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 SF3B4Q15427 424 aaKnown RBP eCLIP3.85□□□□□ -1.79
MDM2-227ENST00000540709 SH2D4BQ5SQS7 431 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 C9orf57Q5W0N0 161 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 JMJD6Q6NYC1 403 aaPredicted RBP3.85□□□□□ -1.79
MDM2-227ENST00000540709 C8orf82Q6P1X6 216 aaPredicted RBP3.85□□□□□ -1.79
MDM2-227ENST00000540709 USP43Q70EL4 1123 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 CACNA2D3Q8IZS8 1091 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 TCP11L2Q8N4U5 519 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 ZBTB8BQ8NAP8 495 aaPredicted RBP3.85□□□□□ -1.79
MDM2-227ENST00000540709 GPT2Q8TD30 523 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 FAM216AQ8WUB2 273 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 AFG1LQ8WV93 481 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 SLC25A33Q9BSK2 321 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 DDX23Q9BUQ8 820 aaKnown RBP3.85□□□□□ -1.79
MDM2-227ENST00000540709 GRHL1Q9NZI5 618 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 NOTCH4Q99466 2003 aa3.85□□□□□ -1.79
MDM2-227ENST00000540709 LOC102724159A0A0B4J2E5 919 aa3.84□□□□□ -1.79
MDM2-227ENST00000540709 IGHV4-28A0A0C4DH34 117 aa3.84□□□□□ -1.79
MDM2-227ENST00000540709 CLEC18AA5D8T8 446 aa3.84□□□□□ -1.79
MDM2-227ENST00000540709 FAM157AC9JC47 383 aa3.84□□□□□ -1.79
MDM2-227ENST00000540709 HBP1O60381 514 aa3.84□□□□□ -1.79
MDM2-227ENST00000540709 PPP1R3DO95685 299 aa3.84□□□□□ -1.79
MDM2-227ENST00000540709 RXRAP19793 462 aa3.84□□□□□ -1.79
MDM2-227ENST00000540709 CHKAP35790 457 aa3.84□□□□□ -1.79
MDM2-227ENST00000540709 MTNR1AP48039 350 aa3.84□□□□□ -1.79
MDM2-227ENST00000540709 MVDP53602 400 aa3.84□□□□□ -1.79
MDM2-227ENST00000540709 TUBA1BP68363 451 aa3.84□□□□□ -1.79
MDM2-227ENST00000540709 THOC5Q13769 683 aaKnown RBP3.84□□□□□ -1.79
MDM2-227ENST00000540709 CTTNQ14247 550 aaKnown RBP3.84□□□□□ -1.79
MDM2-227ENST00000540709 PWP2Q15269 919 aaKnown RBP3.84□□□□□ -1.79
MDM2-227ENST00000540709 SMAD1Q15797 465 aaKnown RBP3.84□□□□□ -1.79
MDM2-227ENST00000540709 KIF19Q2TAC6 998 aa3.84□□□□□ -1.79
MDM2-227ENST00000540709 FBXO43Q4G163 708 aa3.84□□□□□ -1.79
MDM2-227ENST00000540709 TMC8Q8IU68 726 aa3.84□□□□□ -1.79
MDM2-227ENST00000540709 RBFAQ8N0V3 343 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms