RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 MSANTD4Q8NCY6 345 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 ZNF248Q8NDW4 579 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 OR7D4Q8NG98 312 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 BMFQ96LC9 184 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 APOLD1Q96LR9 279 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 HEPHQ9BQS7 1158 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 SLC17A9Q9BYT1 436 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 ZYG11BQ9C0D3 744 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 TNKS2Q9H2K2 1166 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 RETREG1Q9H6L5 497 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 ATP13A1Q9HD20 1204 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 PLCB1Q9NQ66 1216 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 NCKIPSDQ9NZQ3 722 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 PPARGC1AQ9UBK2 798 aaKnown RBP12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 FADS3Q9Y5Q0 445 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 SNX10Q9Y5X0 201 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 CSNK1G3Q9Y6M4 447 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 SPTY2D1-AS1A0A0U1RR47 76 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 K7ESM1 405 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 LSM8O95777 96 aaKnown RBP12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 CSF2P04141 144 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 PNMA6AP0CW24 399 aaPredicted RBP12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 NME1P15531 152 aaKnown RBP12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 FLT3P36888 993 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 ETFBP38117 255 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 RABIFP47224 123 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 LSSP48449 732 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 PCBP4P57723 403 aaKnown RBP12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 ERVPABLB-1P60509 514 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 ARF5P84085 180 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 TPD52L1Q16890 204 aaPredicted RBP12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 CARD16Q5EG05 197 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 DPY19L2P1Q6NXN4 242 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 ZCCHC8Q6NZY4 707 aaKnown RBP12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 TMC6Q7Z403 805 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 PTAR1Q7Z6K3 402 aaPredicted RBP12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 PARGQ86W56 976 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 DENND6BQ8NEG7 585 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 ASB12Q8WXK4 309 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 RAB7BQ96AH8 199 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 ISG20Q96AZ6 181 aaKnown RBP12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 GRAMD1AQ96CP6 724 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 HIC2Q96JB3 615 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 LENG8Q96PV6 779 aaPredicted RBP12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 SPON2Q9BUD6 331 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 NDST4Q9H3R1 872 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 DNAJC28Q9NX36 388 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 TMEM59LQ9UK28 342 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 PCDHB1Q9Y5F3 818 aa12.24□□□□□ -0.45
CBX3P4-202ENST00000540428 LY6G6EA0A0G2JKS1 128 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 POM121BA6NF01 834 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 CAPN8A6NHC0 703 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 FPGTO14772 594 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 TPP1O14773 563 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 TSPAN6O43657 245 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 SRGAP2O75044 1071 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 C1QL1O75973 258 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 ENDOD1O94919 500 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 PAK4O96013 591 aaPredicted RBP12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 CCNHP51946 323 aaPredicted RBP12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 UCNP55089 124 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 GEMIN4P57678 1058 aaKnown RBP12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 NRG1Q02297 640 aaPredicted RBP12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 GNA12Q03113 381 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 CCDC173Q0VFZ6 552 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 MAPK8IP2Q13387 824 aaPredicted RBP12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 FGL2Q14314 439 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 FZD2Q14332 565 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 DRAP1Q14919 205 aaPredicted RBP12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 VWA3BQ502W6 1294 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 IGF2-ASQ6U949 168 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 ZNF548Q8NEK5 533 aaPredicted RBP12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 LGMNQ99538 433 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 ABCG4Q9H172 646 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 POLR1BQ9H9Y6 1135 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 TMPRSS4Q9NRS4 437 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 SALL4Q9UJQ4 1053 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 U3KQA8 63 aa12.23□□□□□ -0.45
CBX3P4-202ENST00000540428 PTPRQQ9UMZ3 2332 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 ERVH48-1M5A8F1 160 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 RAD51BO15315 384 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 USP12O75317 370 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 CSO75390 466 aaKnown RBP12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 CD160O95971 181 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 PRB1P04280 392 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 MPOP05164 745 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 MAPKAPK2P49137 400 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 DNA2P51530 1060 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 UBE2HP62256 183 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 GABREP78334 506 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 SGCGQ13326 291 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 RAPGEF1Q13905 1077 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 CAMK4Q16566 473 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 ARL13BQ3SXY8 428 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 ZNF542PQ5EBM4 170 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 MIIPQ5JXC2 388 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 KLHDC7AQ5VTJ3 777 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 BROXQ5VW32 411 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 TRNP1Q6NT89 227 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 PARS2Q7L3T8 475 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms