RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 MFSD11O43934 449 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 PALMO75781 387 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 POP4O95707 220 aaKnown RBP22.44■■□□□ 1.18
TRIM65-202ENST00000540128 IL1BP01584 269 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 PRNPP04156 253 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 ZFXP17010 805 aaPredicted RBP22.44■■□□□ 1.18
TRIM65-202ENST00000540128 PSMD8P48556 350 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 MARCKSL1P49006 195 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 DNA2P51530 1060 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 CCNHP51946 323 aaPredicted RBP22.44■■□□□ 1.18
TRIM65-202ENST00000540128 MYLK3Q32MK0 819 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 ODF2Q5BJF6 829 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 TMCO4Q5TGY1 634 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 LPCAT2Q7L5N7 544 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 ASCL5Q7RTU5 278 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 CACUL1Q86Y37 369 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 AADATQ8N5Z0 425 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 PLD5Q8N7P1 536 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 PIP4K2CQ8TBX8 421 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 FATE1Q969F0 183 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 TOE1Q96GM8 510 aaKnown RBP22.44■■□□□ 1.18
TRIM65-202ENST00000540128 ZNF419Q96HQ0 510 aaPredicted RBP22.44■■□□□ 1.18
TRIM65-202ENST00000540128 LRIG1Q96JA1 1093 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 TSGA13Q96PP4 275 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 MAK16Q9BXY0 300 aaKnown RBP22.44■■□□□ 1.18
TRIM65-202ENST00000540128 SP110Q9HB58 689 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 HECAQ9UBI9 543 aaPredicted RBP22.44■■□□□ 1.18
TRIM65-202ENST00000540128 LHX3Q9UBR4 397 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 FZD4Q9ULV1 537 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 NCKAP1Q9Y2A7 1128 aa22.44■■□□□ 1.18
TRIM65-202ENST00000540128 C1QTNF3-AMACRE9PGA6 284 aa22.43■■□□□ 1.18
TRIM65-202ENST00000540128 BNIP3LO60238 219 aa22.43■■□□□ 1.18
TRIM65-202ENST00000540128 DRD3P35462 400 aa22.43■■□□□ 1.18
TRIM65-202ENST00000540128 GARSP41250 739 aaKnown RBP22.43■■□□□ 1.18
TRIM65-202ENST00000540128 GBE1Q04446 702 aa22.43■■□□□ 1.18
TRIM65-202ENST00000540128 SLC10A2Q12908 348 aaPredicted RBP22.43■■□□□ 1.18
TRIM65-202ENST00000540128 SPOCD1Q6ZMY3 1216 aa22.43■■□□□ 1.18
TRIM65-202ENST00000540128 GDAP1L1Q96MZ0 367 aa22.43■■□□□ 1.18
TRIM65-202ENST00000540128 TM6SF2Q9BZW4 377 aa22.43■■□□□ 1.18
TRIM65-202ENST00000540128 PCED1AQ9H1Q7 454 aa22.43■■□□□ 1.18
TRIM65-202ENST00000540128 NEUROG2Q9H2A3 272 aa22.43■■□□□ 1.18
TRIM65-202ENST00000540128 SGK2Q9HBY8 427 aa22.43■■□□□ 1.18
TRIM65-202ENST00000540128 IL36AQ9UHA7 158 aa22.43■■□□□ 1.18
TRIM65-202ENST00000540128 AMFRQ9UKV5 643 aa22.43■■□□□ 1.18
TRIM65-202ENST00000540128 NUMA1Q14980 2115 aa22.43■■□□□ 1.18
TRIM65-202ENST00000540128 NYNRINQ9P2P1 1898 aaKnown RBP22.43■■□□□ 1.18
TRIM65-202ENST00000540128 C10orf142B7Z368 130 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 APOL1O14791 398 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 RETP07949 1114 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 MX2P20592 715 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 CSNK1DP48730 415 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 COPS2P61201 443 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 RHOAP61586 193 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 RPL6Q02878 288 aaKnown RBP22.42■■□□□ 1.18
TRIM65-202ENST00000540128 NSUN2Q08J23 767 aaKnown RBP eCLIP22.42■■□□□ 1.18
TRIM65-202ENST00000540128 PPP2R5EQ16537 467 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 LPAL2Q16609 132 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 ARSIQ5FYB1 569 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 TFDP3Q5H9I0 405 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 HDDC3Q8N4P3 179 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 ATPAF2Q8N5M1 289 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 CADM4Q8NFZ8 388 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 RBM41Q96IZ5 413 aaKnown RBP22.42■■□□□ 1.18
TRIM65-202ENST00000540128 PSKH2Q96QS6 385 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 DTLQ9NZJ0 730 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 SERGEFQ9UGK8 458 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 GUCA1BQ9UMX6 200 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 EFR3BQ9Y2G0 817 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 CAPN6Q9Y6Q1 641 aa22.42■■□□□ 1.18
TRIM65-202ENST00000540128 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 A0A1W2PP55 124 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 SLC7A4O43246 635 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 NDUFS2O75306 463 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 LEFTY1O75610 366 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 EPN2O95208 641 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 ACSL1P33121 698 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 METAP1P53582 386 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 TFDP2Q14188 446 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 PEX26Q7Z412 305 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 RFX6Q8HWS3 928 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 TMEFF1Q8IYR6 380 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.41■■□□□ 1.18
TRIM65-202ENST00000540128 OMDQ99983 421 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 CPEB1Q9BZB8 566 aaKnown RBP22.41■■□□□ 1.18
TRIM65-202ENST00000540128 BTBD1Q9H0C5 482 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 SEPT3Q9UH03 358 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 PPP2R2CQ9Y2T4 447 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 PCDHGA5Q9Y5G8 931 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 THADAQ6YHU6 1953 aa22.41■■□□□ 1.18
TRIM65-202ENST00000540128 hCG_1818297A0A087WSY0 165 aa22.4■■□□□ 1.18
TRIM65-202ENST00000540128 MIF4GDA9UHW6 222 aaKnown RBP22.4■■□□□ 1.18
TRIM65-202ENST00000540128 RNF103O00237 685 aa22.4■■□□□ 1.18
TRIM65-202ENST00000540128 RNASEH2AO75792 299 aaKnown RBP22.4■■□□□ 1.18
TRIM65-202ENST00000540128 IGSF6O95976 241 aa22.4■■□□□ 1.18
TRIM65-202ENST00000540128 CCNCP24863 283 aa22.4■■□□□ 1.18
TRIM65-202ENST00000540128 PTPN7P35236 360 aa22.4■■□□□ 1.18
TRIM65-202ENST00000540128 HSPA9P38646 679 aaKnown RBP22.4■■□□□ 1.18
TRIM65-202ENST00000540128 RENBPP51606 427 aa22.4■■□□□ 1.18
TRIM65-202ENST00000540128 RWDD2BP57060 319 aa22.4■■□□□ 1.18
TRIM65-202ENST00000540128 SLC10A7Q0GE19 358 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms