RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 CLIC3O95833 236 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 NDUFV1P49821 464 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 PRKAA1Q13131 559 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 CTBP1Q13363 440 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 CNSTQ6PJW8 725 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 CLVS1Q8IUQ0 354 aaPredicted RBP14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 RNF169Q8NCN4 708 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 FTHL17Q9BXU8 183 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 GTSE1Q9NYZ3 720 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 KIAA1257Q9ULG3 409 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 MYRFQ9Y2G1 1151 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 BRWD3Q6RI45 1802 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 FAM149AA5PLN7 773 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 ZNF839A8K0R7 811 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 I6L893 689 aaPredicted RBP14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 HTRA2O43464 458 aaPredicted RBP14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 SUPT3HO75486 399 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 PSMD7P51665 324 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 MPP1Q00013 466 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 SULT2A1Q06520 285 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 SYPL2Q5VXT5 272 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 DLK2Q6UY11 383 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 NT5DC4Q86YG4 428 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 PSTKQ8IV42 348 aaKnown RBP14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 FBXO16Q8IX29 292 aaPredicted RBP14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 IRGQQ8WZA9 623 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 RMND5BQ96G75 393 aaPredicted RBP14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 MCMBPQ9BTE3 642 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 OSBPL2Q9H1P3 480 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 AS3MTQ9HBK9 375 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 CYP4F12Q9HCS2 524 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 DUS2Q9NX74 493 aaKnown RBP14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 AKT3Q9Y243 479 aa14.12□□□□□ -0.15
SCNN1A-215ENST00000540037 SAC3D1A6NKF1 404 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 AP2A1O95782 977 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 AHSGP02765 367 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 MCF2P10911 925 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 ZBTB17Q13105 803 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 CTU1Q7Z7A3 348 aaKnown RBP14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 ZNF554Q86TJ5 538 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 ZC3HC1Q86WB0 502 aaKnown RBP14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 NPWQ8N729 165 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 HAUS8Q9BT25 410 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 HOXC10Q9NYD6 342 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 IGSF9Q9P2J2 1179 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 BCAP29Q9UHQ4 241 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 CNOT6Q9ULM6 557 aaKnown RBP14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 PGK1P00558 417 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 GJA9P57773 515 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 YBX1P67809 324 aaKnown RBP14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 MAMDC4Q6UXC1 1216 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 FLAD1Q8NFF5 587 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 MIPOL1Q8TD10 442 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 SLC2A14Q8TDB8 520 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 LRCH3Q96II8 777 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 IL22Q9GZX6 179 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 PRMT7Q9NVM4 692 aaPredicted RBP14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 PADI4Q9UM07 663 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 SNX10Q9Y5X0 201 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 SHROOM3Q8TF72 1996 aa14.11□□□□□ -0.15
SCNN1A-215ENST00000540037 TARM1B6A8C7 271 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 TOMM70O94826 608 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 FAM163BP0C2L3 166 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 EDNRBP24530 442 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 PLK1P53350 603 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 C1QTNF8P60827 252 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 RHDQ02161 417 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 AGKQ53H12 422 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 C6orf10Q5SRN2 563 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 LRRC8EQ6NSJ5 796 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 HFE2Q6ZVN8 426 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 CHSY3Q70JA7 882 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 ANKRD23Q86SG2 305 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 CNTD1Q8N815 330 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 TXNDC5Q8NBS9 432 aaKnown RBP14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 STYXQ8WUJ0 223 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 PDGFCQ9NRA1 345 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 CACNA2D2Q9NY47 1150 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 GINS2Q9Y248 185 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 ATP6AP2A0A1C7CYW4 349 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 TIMM44O43615 452 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 TPST1O60507 370 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 ATP6AP2O75787 350 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 CABYRO75952 493 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 DDHD2O94830 711 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 C22orf31O95567 290 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 TSPAN8P19075 237 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 NFKB1P19838 968 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 FUT4P22083 530 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 VARSP26640 1264 aaKnown RBP14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 TKTP29401 623 aaKnown RBP14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 ADIGQ0VDE8 80 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 ANO4Q32M45 955 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 CELF3Q5SZQ8 465 aaKnown RBP14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 REP15Q6BDI9 236 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 ZBTB49Q6ZSB9 765 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 SETD3Q86TU7 594 aaPredicted RBP14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 PPP1R13LQ8WUF5 828 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 CANT1Q8WVQ1 401 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms