RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 HIC2Q96JB3 615 aa15.29■□□□□ 0.04
USB1-203ENST00000539737 PRMT1Q99873 361 aaKnown RBP15.29■□□□□ 0.04
USB1-203ENST00000539737 FAM204AQ9H8W3 233 aa15.29■□□□□ 0.04
USB1-203ENST00000539737 ERVMER34-1Q9H9K5 563 aa15.29■□□□□ 0.04
USB1-203ENST00000539737 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.29■□□□□ 0.04
USB1-203ENST00000539737 TEX51A0A1B0GUA7 166 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 F5H5T6 163 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 J3QKU1 62 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 YKT6O15498 198 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 KLK10O43240 276 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 OPA1O60313 960 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 SNAP91O60641 907 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 CALB1P05937 261 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 UNGP13051 313 aaPredicted RBP15.28■□□□□ 0.04
USB1-203ENST00000539737 MMP8P22894 467 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 PRKCIP41743 596 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 OXCT1P55809 520 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 ZBED6P86452 979 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 DLG2Q15700 870 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 RABGAP1LQ5R372 815 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 TPRG1LQ5T0D9 272 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 FAM102AQ5T9C2 384 aaPredicted RBP15.28■□□□□ 0.04
USB1-203ENST00000539737 PIP5KL1Q5T9C9 394 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 SPECC1LQ69YQ0 1117 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 SARM1Q6SZW1 724 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 IRF2BP2Q7Z5L9 587 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 XYLT1Q86Y38 959 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 KDM1BQ8NB78 822 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 CHST14Q8NCH0 376 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 SYN2Q92777 582 aaPredicted RBP15.28■□□□□ 0.04
USB1-203ENST00000539737 FAM131CQ96AQ9 280 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 KLHDC7BQ96G42 594 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 APOLD1Q96LR9 279 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 PPP1R9BQ96SB3 815 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 ANLNQ9NQW6 1124 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 RRN3Q9NYV6 651 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 PPM1HQ9ULR3 514 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 CAPN11Q9UMQ6 739 aa15.28■□□□□ 0.04
USB1-203ENST00000539737 ZFR2Q9UPR6 939 aaKnown RBP15.28■□□□□ 0.04
USB1-203ENST00000539737 RP1P56715 2156 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 CNTN5O94779 1100 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 ENDOD1O94919 500 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 IGLV3-25P01717 112 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 GYPCP04921 128 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 TPM1P09493 284 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 TNFAIP3P21580 790 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 CCR1P32246 355 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 GSCP56915 257 aaPredicted RBP15.27■□□□□ 0.04
USB1-203ENST00000539737 KLHL30Q0D2K2 578 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 ZNF211Q13398 564 aaPredicted RBP15.27■□□□□ 0.04
USB1-203ENST00000539737 C3orf38Q5JPI3 329 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 TTC39BQ5VTQ0 682 aaPredicted RBP15.27■□□□□ 0.04
USB1-203ENST00000539737 CDCP2Q5VXM1 449 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 FBXL22Q6P050 247 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 FOXR1Q6PIV2 292 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 LINGO4Q6UY18 593 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 GCNT7Q6ZNI0 430 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 PHF13Q86YI8 300 aaPredicted RBP15.27■□□□□ 0.04
USB1-203ENST00000539737 DEFB106AQ8N104 65 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 FAM181AQ8N9Y4 354 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 TMEM145Q8NBT3 493 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 OR8D1Q8WZ84 308 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 VCPIP1Q96JH7 1222 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 PCDHB18PQ96TA0 734 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 C11orf70Q9BRQ4 267 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 TMPRSS4Q9NRS4 437 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 WDR70Q9NW82 654 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 TMEM51Q9NW97 253 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 DDIT4Q9NX09 232 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 VANGL2Q9ULK5 521 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 STAP1Q9ULZ2 295 aa15.27■□□□□ 0.04
USB1-203ENST00000539737 LUC7L2Q9Y383 392 aaKnown RBP15.27■□□□□ 0.04
USB1-203ENST00000539737 BZW2Q9Y6E2 419 aaKnown RBP15.27■□□□□ 0.04
USB1-203ENST00000539737 AGRPO00253 132 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 KPNA3O00505 521 aaPredicted RBP15.26■□□□□ 0.03
USB1-203ENST00000539737 RAD51BO15315 384 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 SMAD6O43541 496 aaKnown RBP15.26■□□□□ 0.03
USB1-203ENST00000539737 PIAS2O75928 621 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 TGM2P21980 687 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 RRM1P23921 792 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 NOS2P35228 1153 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 PCBP4P57723 403 aaKnown RBP15.26■□□□□ 0.03
USB1-203ENST00000539737 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
USB1-203ENST00000539737 SRSF6Q13247 344 aaKnown RBP15.26■□□□□ 0.03
USB1-203ENST00000539737 ILKQ13418 452 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 SLC12A1Q13621 1099 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 FGL2Q14314 439 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 ZNF284Q2VY69 593 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 SETMARQ53H47 684 aaPredicted RBP15.26■□□□□ 0.03
USB1-203ENST00000539737 TDRD12Q587J7 1177 aaKnown RBP15.26■□□□□ 0.03
USB1-203ENST00000539737 E4F1Q66K89 784 aaPredicted RBP15.26■□□□□ 0.03
USB1-203ENST00000539737 VPS36Q86VN1 386 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 TRIM69Q86WT6 500 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 VSTM4Q8IW00 320 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 OXR1Q8N573 874 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 ZNF248Q8NDW4 579 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 OR4C6Q8NH72 309 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 SLC30A5Q8TAD4 765 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 GRIN3AQ8TCU5 1115 aa15.26■□□□□ 0.03
USB1-203ENST00000539737 RPRD1AQ96P16 312 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms