RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 LZTR1Q8N653 840 aa16.02■□□□□ 0.15
RPAIN-206ENST00000539417 GANCQ8TET4 914 aa16.02■□□□□ 0.15
RPAIN-206ENST00000539417 ISG20Q96AZ6 181 aaKnown RBP16.02■□□□□ 0.15
RPAIN-206ENST00000539417 ZNF830Q96NB3 372 aaPredicted RBP16.02■□□□□ 0.15
RPAIN-206ENST00000539417 HERPUD2Q9BSE4 406 aa16.02■□□□□ 0.15
RPAIN-206ENST00000539417 ARRDC1-AS1Q9H2J1 176 aa16.02■□□□□ 0.15
RPAIN-206ENST00000539417 TMEM74BQ9NUR3 256 aa16.02■□□□□ 0.15
RPAIN-206ENST00000539417 HECAQ9UBI9 543 aaPredicted RBP16.02■□□□□ 0.15
RPAIN-206ENST00000539417 EVLQ9UI08 416 aaPredicted RBP16.02■□□□□ 0.15
RPAIN-206ENST00000539417 RAB23Q9ULC3 237 aa16.02■□□□□ 0.15
RPAIN-206ENST00000539417 SLCO1B1Q9Y6L6 691 aa16.02■□□□□ 0.15
RPAIN-206ENST00000539417 DMXL1Q9Y485 3027 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 CXorf51AA0A1B0GTR3 108 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 TTC24A2A3L6 582 aaPredicted RBP16.01■□□□□ 0.15
RPAIN-206ENST00000539417 ZSCAN5CA6NGD5 496 aaPredicted RBP16.01■□□□□ 0.15
RPAIN-206ENST00000539417 PSTPIP1O43586 416 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 PALMO75781 387 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 RNASEH2AO75792 299 aaKnown RBP16.01■□□□□ 0.15
RPAIN-206ENST00000539417 EPN2O95208 641 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 C5AR1P21730 350 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 ITPKAP23677 461 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 MAOBP27338 520 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 IL10RBQ08334 325 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 SLC10A7Q0GE19 358 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 SPEM2Q0P670 501 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 KIF5AQ12840 1032 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 CNTN1Q12860 1018 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 BYSLQ13895 437 aaKnown RBP16.01■□□□□ 0.15
RPAIN-206ENST00000539417 ELF2Q15723 593 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 TAZQ16635 292 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 INO80DQ53TQ3 878 aaPredicted RBP16.01■□□□□ 0.15
RPAIN-206ENST00000539417 AADACL2Q6P093 401 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.01■□□□□ 0.15
RPAIN-206ENST00000539417 B4GALNT4Q76KP1 1039 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 LPCAT2Q7L5N7 544 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 MAP7D3Q8IWC1 876 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 PGBD5Q8N414 524 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 TSEN2Q8NCE0 465 aaKnown RBP16.01■□□□□ 0.15
RPAIN-206ENST00000539417 CCDC112Q8NEF3 446 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 OR2AP1Q8NGE2 309 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 KCNF1Q9H3M0 494 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 ZDHHC6Q9H6R6 413 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 SP110Q9HB58 689 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 NCDNQ9UBB6 729 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 IL36AQ9UHA7 158 aa16.01■□□□□ 0.15
RPAIN-206ENST00000539417 PACSIN2Q9UNF0 486 aaPredicted RBP16.01■□□□□ 0.15
RPAIN-206ENST00000539417 SHROOM3Q8TF72 1996 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 KPNA3O00505 521 aaPredicted RBP16■□□□□ 0.15
RPAIN-206ENST00000539417 ALOX15BO15296 676 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 RHOBTB1O94844 696 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 FTCDO95954 541 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 ADH1BP00325 375 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 CDKN2BP42772 138 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 PEX5P50542 639 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 GEMIN4P57678 1058 aaKnown RBP16■□□□□ 0.15
RPAIN-206ENST00000539417 TAS2R38P59533 333 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 RHOAP61586 193 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 DYNLT1P63172 113 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 CREB5Q02930 508 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 ZNF33AQ06730 810 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 GALNT2Q10471 571 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 MYLK3Q32MK0 819 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 SLC9A4Q6AI14 798 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 SLC36A4Q6YBV0 504 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 SPOCD1Q6ZMY3 1216 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 USP30Q70CQ3 517 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 NT5DC3Q86UY8 548 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 KATNAL2Q8IYT4 538 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 RYBPQ8N488 228 aaPredicted RBP16■□□□□ 0.15
RPAIN-206ENST00000539417 KIAA1524Q8TCG1 905 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 RUBCNQ92622 972 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 ALG3Q92685 438 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 FAM131CQ96AQ9 280 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 HSPA12BQ96MM6 686 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 OMDQ99983 421 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 HEPHQ9BQS7 1158 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 DDX56Q9NY93 547 aaKnown RBP16■□□□□ 0.15
RPAIN-206ENST00000539417 DONSONQ9NYP3 566 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 DTLQ9NZJ0 730 aa16■□□□□ 0.15
RPAIN-206ENST00000539417 FAM47DPA6NHR8 397 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 PATE3B3GLJ2 98 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 KRIT1O00522 736 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 NDUFS2O75306 463 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 GSRP00390 522 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 RETP07949 1114 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 OXTRP30559 389 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 CTNNA1P35221 906 aaKnown RBP15.99■□□□□ 0.15
RPAIN-206ENST00000539417 RECQLP46063 649 aaPredicted RBP15.99■□□□□ 0.15
RPAIN-206ENST00000539417 TTC31Q49AM3 519 aaPredicted RBP15.99■□□□□ 0.15
RPAIN-206ENST00000539417 AGBL4Q5VU57 503 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 RFX6Q8HWS3 928 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 ATPAF2Q8N5M1 289 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 TMIEQ8NEW7 156 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 PDLIM2Q96JY6 352 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 BTBD1Q9H0C5 482 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 SAE1Q9UBE0 346 aaPredicted RBP15.99■□□□□ 0.15
RPAIN-206ENST00000539417 GUCA1BQ9UMX6 200 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 PCDHA3Q9Y5H8 950 aa15.99■□□□□ 0.15
RPAIN-206ENST00000539417 BCLAF3A2AJT9 711 aaKnown RBP15.98■□□□□ 0.15
RPAIN-206ENST00000539417 ZNF487B1APH4 448 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms