RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 F8W8V4 182 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 TM7SF2O76062 418 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 VAPBO95292 243 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 PAMP19021 973 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 ARNTP27540 789 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 RENBPP51606 427 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 MRPL58Q14197 206 aaKnown RBP18.17■□□□□ 0.5
GNE-204ENST00000539208 USP10Q14694 798 aaKnown RBP18.17■□□□□ 0.5
GNE-204ENST00000539208 KPNB1Q14974 876 aaKnown RBP18.17■□□□□ 0.5
GNE-204ENST00000539208 VARS2Q5ST30 1063 aaKnown RBP18.17■□□□□ 0.5
GNE-204ENST00000539208 KIAA0930Q6ICG6 404 aaPredicted RBP18.17■□□□□ 0.5
GNE-204ENST00000539208 ESRP1Q6NXG1 681 aaKnown RBP18.17■□□□□ 0.5
GNE-204ENST00000539208 ZYG11AQ6WRX3 759 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 NAPRTQ6XQN6 538 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 TSNARE1Q96NA8 513 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 FTHL17Q9BXU8 183 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 ACE2Q9BYF1 805 aaPredicted RBP18.17■□□□□ 0.5
GNE-204ENST00000539208 ZYG11BQ9C0D3 744 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.17■□□□□ 0.5
GNE-204ENST00000539208 TRPV6Q9H1D0 765 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 TMEM248Q9NWD8 314 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 CLIC5Q9NZA1 410 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 ABT1Q9ULW3 272 aaKnown RBP18.17■□□□□ 0.5
GNE-204ENST00000539208 IGLV3-10A0A075B6K4 115 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.16■□□□□ 0.5
GNE-204ENST00000539208 TADA2AO75478 443 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 NEBLO76041 1014 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 HSPA4LO95757 839 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 SLC35E2BP0CK96 405 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 HK2P52789 917 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 TNK2Q07912 1038 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 ACSBG2Q5FVE4 666 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 KDELC1Q6UW63 502 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 EPGNQ6UW88 154 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 RAPH1Q70E73 1250 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 SLC43A3Q8NBI5 491 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 FBXO27Q8NI29 283 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 FAM193BQ96PV7 902 aaPredicted RBP18.16■□□□□ 0.5
GNE-204ENST00000539208 TSEN34Q9BSV6 310 aaKnown RBP18.16■□□□□ 0.5
GNE-204ENST00000539208 ATP13A1Q9HD20 1204 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 DNAJB4Q9UDY4 337 aa18.16■□□□□ 0.5
GNE-204ENST00000539208 PMPCBO75439 489 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 GPR15P49685 360 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 MS4A13Q5J8X5 152 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 ACBD5Q5T8D3 534 aaPredicted RBP18.15■□□□□ 0.5
GNE-204ENST00000539208 SDHAF4Q5VUM1 108 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 METTL21CQ5VZV1 264 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 NET1Q7Z628 596 aaPredicted RBP18.15■□□□□ 0.5
GNE-204ENST00000539208 C2CD4AQ8NCU7 369 aaPredicted RBP18.15■□□□□ 0.5
GNE-204ENST00000539208 IMP4Q96G21 291 aaKnown RBP18.15■□□□□ 0.5
GNE-204ENST00000539208 GATA5Q9BWX5 397 aaPredicted RBP18.15■□□□□ 0.5
GNE-204ENST00000539208 TASP1Q9H6P5 420 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 VPS45Q9NRW7 570 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 OLA1Q9NTK5 396 aaKnown RBP18.15■□□□□ 0.5
GNE-204ENST00000539208 TMEM161AQ9NX61 479 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 GMIPQ9P107 970 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 PRG3Q9Y2Y8 225 aaPredicted RBP18.15■□□□□ 0.5
GNE-204ENST00000539208 ACOT9Q9Y305 439 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 OR6C75A6NL08 312 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 RPSAP08865 295 aaKnown RBP18.15■□□□□ 0.5
GNE-204ENST00000539208 CRABP2P29373 138 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 GRK4P32298 578 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 ELF1P32519 619 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 PSEN1P49768 467 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 WNT3AP56704 352 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 USP46P62068 366 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 SP3Q02447 781 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 LIPMQ5VYY2 423 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 SCUBE1Q8IWY4 988 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 ZNF781Q8N8C0 355 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 ATP6V0D2Q8N8Y2 350 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 STYXQ8WUJ0 223 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 WDR60Q8WVS4 1066 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 BTN2A3PQ96KV6 586 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 ZNF570Q96NI8 536 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 RANBP9Q96S59 729 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 FAM167BQ9BTA0 163 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.15■□□□□ 0.5
GNE-204ENST00000539208 STOML1Q9UBI4 398 aa18.15■□□□□ 0.5
GNE-204ENST00000539208 CCDC78A2IDD5 438 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 TARM1B6A8C7 271 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 PSMG1O95456 288 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 SBK3P0C264 359 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 CPOXP36551 454 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 PTDSS1P48651 473 aaKnown RBP18.14■□□□□ 0.49
GNE-204ENST00000539208 RAB10P61026 200 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 TRIP4Q15650 581 aaPredicted RBP18.14■□□□□ 0.49
GNE-204ENST00000539208 CNGA3Q16281 694 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 CTXN3Q4LDR2 81 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 CMPK2Q5EBM0 449 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 KIAA0408Q6ZU52 694 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 DENND6AQ8IWF6 608 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 STON2Q8WXE9 905 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 DRC3Q9H069 523 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 ILKAPQ9H0C8 392 aaPredicted RBP18.14■□□□□ 0.49
GNE-204ENST00000539208 YY1AP1Q9H869 796 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 COG4Q9H9E3 785 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 RUVBL2Q9Y230 463 aaKnown RBP18.14■□□□□ 0.49
GNE-204ENST00000539208 H0Y3Z8 333 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 RTN3O95197 1032 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms