RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 SPATA13Q96N96 652 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 PSKH2Q96QS6 385 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 MTG2Q9H4K7 406 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 MRPS17Q9Y2R5 130 aaKnown RBP23.88■■□□□ 1.41
TMEM260-202ENST00000538838 NCOR1O75376 2440 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 C5orf60A6NFR6 353 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 WASH3PC4AMC7 463 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 ZBTB24O43167 697 aaPredicted RBP23.88■■□□□ 1.41
TMEM260-202ENST00000538838 ZNF821O75541 412 aaPredicted RBP23.88■■□□□ 1.41
TMEM260-202ENST00000538838 ECEL1O95672 775 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 ZSCAN5DPP0CG00 497 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 CHRNB1P11230 501 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 HLA-EP13747 358 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 WASP42768 502 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 ANKRD20A2Q5SQ80 823 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 ANKRD20A1Q5TYW2 823 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 ANKRD20A3Q5VUR7 823 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 Q6ZVU0 165 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 METTL3Q86U44 580 aaKnown RBP23.88■■□□□ 1.41
TMEM260-202ENST00000538838 CHPFQ8IZ52 775 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.88■■□□□ 1.41
TMEM260-202ENST00000538838 TEKT5Q96M29 485 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 VAT1Q99536 393 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 CEP44Q9C0F1 390 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 TMEM245Q9H330 911 aa23.88■■□□□ 1.41
TMEM260-202ENST00000538838 F5H423 210 aaPredicted RBP23.87■■□□□ 1.41
TMEM260-202ENST00000538838 DCXO43602 365 aa23.87■■□□□ 1.41
TMEM260-202ENST00000538838 GJB3O75712 270 aa23.87■■□□□ 1.41
TMEM260-202ENST00000538838 PTGIRP43119 386 aa23.87■■□□□ 1.41
TMEM260-202ENST00000538838 MRPS25P82663 173 aaKnown RBP23.87■■□□□ 1.41
TMEM260-202ENST00000538838 DR1Q01658 176 aa23.87■■□□□ 1.41
TMEM260-202ENST00000538838 TRIP13Q15645 432 aaPredicted RBP23.87■■□□□ 1.41
TMEM260-202ENST00000538838 FBXO43Q4G163 708 aa23.87■■□□□ 1.41
TMEM260-202ENST00000538838 ATXN7L2Q5T6C5 722 aaPredicted RBP23.87■■□□□ 1.41
TMEM260-202ENST00000538838 PID1Q7Z2X4 250 aa23.87■■□□□ 1.41
TMEM260-202ENST00000538838 KDM1BQ8NB78 822 aa23.87■■□□□ 1.41
TMEM260-202ENST00000538838 NOA1Q8NC60 698 aaKnown RBP23.87■■□□□ 1.41
TMEM260-202ENST00000538838 EDAQ92838 391 aa23.87■■□□□ 1.41
TMEM260-202ENST00000538838 RUNDC3BQ96NL0 473 aa23.87■■□□□ 1.41
TMEM260-202ENST00000538838 MGME1Q9BQP7 344 aa23.87■■□□□ 1.41
TMEM260-202ENST00000538838 ATP8A1Q9Y2Q0 1164 aa23.87■■□□□ 1.41
TMEM260-202ENST00000538838 STON1Q9Y6Q2 735 aa23.87■■□□□ 1.41
TMEM260-202ENST00000538838 TTC24A2A3L6 582 aaPredicted RBP23.86■■□□□ 1.41
TMEM260-202ENST00000538838 BNIP3LO60238 219 aa23.86■■□□□ 1.41
TMEM260-202ENST00000538838 GAS8O95995 478 aa23.86■■□□□ 1.41
TMEM260-202ENST00000538838 CD68P34810 354 aaPredicted RBP23.86■■□□□ 1.41
TMEM260-202ENST00000538838 SIGLEC14Q08ET2 396 aa23.86■■□□□ 1.41
TMEM260-202ENST00000538838 P3H1Q32P28 736 aa23.86■■□□□ 1.41
TMEM260-202ENST00000538838 Q6ZS52 159 aa23.86■■□□□ 1.41
TMEM260-202ENST00000538838 PCDH20Q8N6Y1 951 aaKnown RBP23.86■■□□□ 1.41
TMEM260-202ENST00000538838 IL17RCQ8NAC3 791 aa23.86■■□□□ 1.41
TMEM260-202ENST00000538838 RPLP0P6Q8NHW5 317 aa23.86■■□□□ 1.41
TMEM260-202ENST00000538838 SLCO2A1Q92959 643 aa23.86■■□□□ 1.41
TMEM260-202ENST00000538838 ISG20Q96AZ6 181 aaKnown RBP23.86■■□□□ 1.41
TMEM260-202ENST00000538838 TRHDEQ9UKU6 1024 aa23.86■■□□□ 1.41
TMEM260-202ENST00000538838 SLC8A2Q9UPR5 921 aa23.86■■□□□ 1.41
TMEM260-202ENST00000538838 FAM170BA6NMN3 283 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 TTI1O43156 1089 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 OPHN1O60890 802 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 GCATO75600 419 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 KLF8O95600 359 aaPredicted RBP23.85■■□□□ 1.41
TMEM260-202ENST00000538838 KRT14P02533 472 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 NFKB1P19838 968 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 ITKQ08881 620 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 ENPP2Q13822 863 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 LRRC32Q14392 662 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 ARHGEF18Q6ZSZ5 1173 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 TAB3Q8N5C8 712 aaPredicted RBP23.85■■□□□ 1.41
TMEM260-202ENST00000538838 OR6K2Q8NGY2 324 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 KCNV2Q8TDN2 545 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 ERLEC1Q96DZ1 483 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 POLR1EQ9GZS1 481 aaKnown RBP23.85■■□□□ 1.41
TMEM260-202ENST00000538838 PCDH9Q9HC56 1237 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 FEZ2Q9UHY8 353 aaPredicted RBP23.85■■□□□ 1.41
TMEM260-202ENST00000538838 NEU2Q9Y3R4 380 aa23.85■■□□□ 1.41
TMEM260-202ENST00000538838 STK25O00506 426 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 NPC1O15118 1278 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 RAD51CO43502 376 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 HSPA9P38646 679 aaKnown RBP23.84■■□□□ 1.41
TMEM260-202ENST00000538838 VPS41P49754 854 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 MRPS21P82921 87 aaKnown RBP23.84■■□□□ 1.41
TMEM260-202ENST00000538838 DSC2Q02487 901 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 FZD5Q13467 585 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 DHX34Q14147 1143 aaKnown RBP23.84■■□□□ 1.41
TMEM260-202ENST00000538838 E2F5Q15329 346 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 PPP1R7Q15435 360 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 HNRNPA1L2Q32P51 320 aaKnown RBP23.84■■□□□ 1.41
TMEM260-202ENST00000538838 PKN3Q6P5Z2 889 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 JAMLQ86YT9 394 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 TXNDC5Q8NBS9 432 aaKnown RBP23.84■■□□□ 1.41
TMEM260-202ENST00000538838 TRIM51Q9BSJ1 452 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 GBA3Q9H227 469 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 LMAN1LQ9HAT1 526 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 GLOD4Q9HC38 313 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 RSPH14Q9UHP6 348 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 A0A0C4DFX4 3053 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 IGSF6O95976 241 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 EPHX1P07099 455 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 NTSR1P30989 418 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 RPL22P35268 128 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms