RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 GCNAQ96QF7 691 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 RHOJQ9H4E5 214 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 PDP2Q9P2J9 529 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 INPP5FQ9Y2H2 1132 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 FIS1Q9Y3D6 152 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 MYLKQ15746 1914 aa12.14□□□□□ -0.47
CPNE8-203ENST00000538596 MAGEB16A2A368 324 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 NEMP2A6NFY4 417 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 CTSHP09668 335 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 VCLP18206 1134 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 ARNTP27540 789 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 CHRNA4P43681 627 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 AIF1P55008 147 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 MRPS22P82650 360 aaKnown RBP12.13□□□□□ -0.47
CPNE8-203ENST00000538596 TSTD2Q5T7W7 516 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 SREK1Q8WXA9 508 aaKnown RBP12.13□□□□□ -0.47
CPNE8-203ENST00000538596 JADE3Q92613 823 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 MYLPFQ96A32 169 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 PGAP3Q96FM1 320 aaPredicted RBP12.13□□□□□ -0.47
CPNE8-203ENST00000538596 TMEM209Q96SK2 561 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 FICDQ9BVA6 458 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 KIFC1Q9BW19 673 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 TMLHEQ9NVH6 421 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 MSI1O43347 362 aaKnown RBP12.13□□□□□ -0.47
CPNE8-203ENST00000538596 PMPCBO75439 489 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 ENO3P13929 434 aaPredicted RBP12.13□□□□□ -0.47
CPNE8-203ENST00000538596 UQCRBP14927 111 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 GRIA2P42262 883 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 SCNN1GP51170 649 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 MS4A2Q01362 244 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 MED21Q13503 144 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 TIGD5Q53EQ6 642 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 METTL21CQ5VZV1 264 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 NAPEPLDQ6IQ20 393 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 LRRC8EQ6NSJ5 796 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 ACAD11Q709F0 780 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 FAM156AQ8NDB6 213 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 RTP3Q9BQQ7 232 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 CPA4Q9UI42 421 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 PCDHGB4Q9UN71 923 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 PCDHGB5Q9Y5G0 923 aa12.13□□□□□ -0.47
CPNE8-203ENST00000538596 RGSL1A5PLK6 1076 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 TARM1B6A8C7 271 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 THRAP10827 490 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 TCN1P20061 433 aaPredicted RBP12.12□□□□□ -0.47
CPNE8-203ENST00000538596 PRDX6P30041 224 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 FRG1Q14331 258 aaKnown RBP12.12□□□□□ -0.47
CPNE8-203ENST00000538596 PRPSAP1Q14558 356 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 CNGA3Q16281 694 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 MMEL1Q495T6 779 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 PM20D1Q6GTS8 502 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 DENND5AQ6IQ26 1287 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 PKN3Q6P5Z2 889 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 KYQ8NBH2 561 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 DQX1Q8TE96 717 aaKnown RBP12.12□□□□□ -0.47
CPNE8-203ENST00000538596 STYXQ8WUJ0 223 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 GPR78Q96P69 363 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 TBL1YQ9BQ87 522 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 ZDHHC7Q9NXF8 308 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 SFMBT1Q9UHJ3 866 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 NEU3Q9UQ49 428 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 RAD54BQ9Y620 910 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 FAM95CA0A1B0GW59 222 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 C17orf102A2RUQ5 167 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 HAS3O00219 553 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 MTSS1O43312 755 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 DDHD2O94830 711 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 THP07101 528 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 HNRNPLP14866 589 aaKnown RBP eCLIP12.12□□□□□ -0.47
CPNE8-203ENST00000538596 SLC1A2P43004 574 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 LHX1P48742 406 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 SLC12A1Q13621 1099 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 CEACAM7Q14002 265 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 CYLC2Q14093 348 aaPredicted RBP12.12□□□□□ -0.47
CPNE8-203ENST00000538596 ZNF789Q5FWF6 425 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 RNF135Q8IUD6 432 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 APLFQ8IW19 511 aaPredicted RBP12.12□□□□□ -0.47
CPNE8-203ENST00000538596 ARHGAP12Q8IWW6 846 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 SNX31Q8N9S9 440 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 SMARCD1Q96GM5 515 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 TSNARE1Q96NA8 513 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 TRAPPC9Q96Q05 1148 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 NPAS2Q99743 824 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 ACOT9Q9Y305 439 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 CABYRO75952 493 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 ZNF865P0CJ78 1059 aaPredicted RBP12.12□□□□□ -0.47
CPNE8-203ENST00000538596 ETS2P15036 469 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 BRCC3P46736 316 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 ALDH1A3P47895 512 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 ARCN1P48444 511 aaKnown RBP12.12□□□□□ -0.47
CPNE8-203ENST00000538596 FOLH1Q04609 750 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 NSUN2Q08J23 767 aaKnown RBP eCLIP12.12□□□□□ -0.47
CPNE8-203ENST00000538596 INTS6LQ5JSJ4 861 aaKnown RBP12.12□□□□□ -0.47
CPNE8-203ENST00000538596 DCLRE1AQ6PJP8 1040 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 SDCCAG8Q86SQ7 713 aaPredicted RBP12.12□□□□□ -0.47
CPNE8-203ENST00000538596 TXNDC5Q8NBS9 432 aaKnown RBP12.12□□□□□ -0.47
CPNE8-203ENST00000538596 ZC3H15Q8WU90 426 aaKnown RBP12.12□□□□□ -0.47
CPNE8-203ENST00000538596 VAT1Q99536 393 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 NDNQ99608 321 aa12.12□□□□□ -0.47
CPNE8-203ENST00000538596 SLC39A8Q9C0K1 460 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms