RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 PERM1Q5SV97 790 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 TPRG1LQ5T0D9 272 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 KIAA1161Q6NSJ0 714 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 TTI2Q6NXR4 508 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 GJB7Q6PEY0 223 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 IGF2-ASQ6U949 168 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 CCDC81Q6ZN84 652 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 DCAF4L2Q8NA75 395 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 SPATA20Q8TB22 786 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 FAM174AQ8TBP5 190 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 CCDC97Q96F63 343 aaPredicted RBP14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 PRR11Q96HE9 360 aaPredicted RBP14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 DHTKD1Q96HY7 919 aaPredicted RBP14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 PPP1R13BQ96KQ4 1090 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 PIGVQ9NUD9 493 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 NCKIPSDQ9NZQ3 722 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 SSUH2Q9Y2M2 353 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 HS3ST3A1Q9Y663 406 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 DOCK4Q8N1I0 1966 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 PTPN13Q12923 2485 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 ARHGAP6O43182 974 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 DAB1O75553 588 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 TNFSF15O95150 251 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 AFPP02771 609 aaKnown RBP14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 ERBB2P04626 1255 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 RABIFP47224 123 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 DNA2P51530 1060 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 CLCN6P51797 869 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 SKOR1P84550 965 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 CLN3Q13286 438 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 MTA1Q13330 715 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 NR0B2Q15466 257 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 C5orf22Q49AR2 442 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 OTUD1Q5VV17 481 aaPredicted RBP14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 C11orf57Q6ZUT1 292 aaPredicted RBP14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 TRIM59Q8IWR1 403 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 RBFAQ8N0V3 343 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 ARL14Q8N4G2 192 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 WDTC1Q8N5D0 677 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 OR7D4Q8NG98 312 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 IL12RB2Q99665 862 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 TRIM4Q9C037 500 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 TKTL2Q9H0I9 626 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 ANLNQ9NQW6 1124 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 ASNSD1Q9NWL6 643 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 MPP6Q9NZW5 540 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 CTNND2Q9UQB3 1225 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 PCDHGA8Q9Y5G5 932 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 FADS3Q9Y5Q0 445 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 CSNK1G3Q9Y6M4 447 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 WASF2Q9Y6W5 498 aa14.29□□□□□ -0.12
SMARCA4-206ENST00000538456 EME2A4GXA9 379 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 BECN2A8MW95 431 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 CDRT15L2A8MXV6 281 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 I6L893 689 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 FPGTO14772 594 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 SPINT1O43278 529 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 WISP1O95388 367 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 TFE3P19532 575 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 ITGB7P26010 798 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 OR1E1P30953 314 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 NFATC3Q12968 1075 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 SGCGQ13326 291 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 ARHGAP44Q17R89 818 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 OLFML1Q6UWY5 402 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 PARS2Q7L3T8 475 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 SETD3Q86TU7 594 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 C1orf131Q8NDD1 294 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 WDR36Q8NI36 951 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 NELFBQ8WX92 580 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 AHCTF1Q8WYP5 2266 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 GRAMD1AQ96CP6 724 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 FEM1CQ96JP0 617 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 CRACR2AQ9BSW2 395 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 SPON2Q9BUD6 331 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 TCEAL2Q9H3H9 227 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 ZDHHC6Q9H6R6 413 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 SYNCQ9H7C4 482 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 TMPRSS4Q9NRS4 437 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 MAN1B1Q9UKM7 699 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 ITM2BQ9Y287 266 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 COL12A1Q99715 3063 aa14.28□□□□□ -0.12
SMARCA4-206ENST00000538456 FAM170AA1A519 330 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 GOLGA6L4A6NEF3 574 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 IGLON5A6NGN9 336 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 NEMP1O14524 444 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 ZNF821O75541 412 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 TCEA3O75764 348 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 CCNHP51946 323 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 PDX1P52945 283 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 STX17P56962 302 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 RNASE9P60153 205 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 APBA1Q02410 837 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 EIF2B5Q13144 721 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 C1orf61Q13536 156 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 SPIDRQ14159 915 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 PRRT3Q5FWE3 981 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 LRRC31Q6UY01 552 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms