RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 PSMC3P17980 439 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 CR2P20023 1033 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 ADRA1AP35348 466 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 HSD17B3P37058 310 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 MAGEA3P43357 314 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 RGRP47804 291 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 SLC6A11P48066 632 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 PMS2P54278 862 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 ARL4CP56559 192 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 MAXP61244 160 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 SKOR1P84550 965 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 DSC2Q02487 901 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 NSUN2Q08J23 767 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPARC-207ENST00000537849 SPARCL1Q14515 664 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 PRPSAP1Q14558 356 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 DMC1Q14565 340 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 PITRM1Q5JRX3 1037 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 UBAP2Q5T6F2 1119 aaKnown RBP11.91□□□□□ -0.5
SPARC-207ENST00000537849 TMEM215Q68D42 235 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 LRRC8BQ6P9F7 803 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 KDELC1Q6UW63 502 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 LINGO4Q6UY18 593 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 ADIPOR2Q86V24 386 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 CCDC25Q86WR0 208 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 IGDCC3Q8IVU1 814 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 ETFBKMTQ8IXQ9 262 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 AGGF1Q8N302 714 aaeCLIP11.91□□□□□ -0.5
SPARC-207ENST00000537849 ZNF557Q8N988 423 aaPredicted RBP11.91□□□□□ -0.5
SPARC-207ENST00000537849 ATP2A3Q93084 1043 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 TTC17Q96AE7 1141 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 SIGLEC10Q96LC7 697 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 GUCD1Q96NT3 240 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 SERPINB12Q96P63 405 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 KXD1Q9BQD3 176 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 C2orf49Q9BVC5 232 aaPredicted RBP11.91□□□□□ -0.5
SPARC-207ENST00000537849 PHACTR1Q9C0D0 580 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 UBE2ZQ9H832 354 aaPredicted RBP11.91□□□□□ -0.5
SPARC-207ENST00000537849 SAYSD1Q9NPB0 183 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 UBP1Q9NZI7 540 aa11.91□□□□□ -0.5
SPARC-207ENST00000537849 AAR2Q9Y312 384 aaKnown RBP11.91□□□□□ -0.5
SPARC-207ENST00000537849 K7ERQ8 282 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 MBTPS2O43462 519 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 SMAD6O43541 496 aaKnown RBP11.9□□□□□ -0.5
SPARC-207ENST00000537849 BANF1O75531 89 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 ZNF821O75541 412 aaPredicted RBP11.9□□□□□ -0.5
SPARC-207ENST00000537849 GJB3O75712 270 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 TMCC1O94876 653 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 AGTP01019 485 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 PABPC1P11940 636 aaKnown RBP11.9□□□□□ -0.5
SPARC-207ENST00000537849 CTSOP43234 321 aaPredicted RBP11.9□□□□□ -0.5
SPARC-207ENST00000537849 TNNT3P45378 269 aaPredicted RBP11.9□□□□□ -0.5
SPARC-207ENST00000537849 LMAN1P49257 510 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 GEMP55040 296 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 ITKQ08881 620 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 PDIA2Q13087 525 aaKnown RBP11.9□□□□□ -0.5
SPARC-207ENST00000537849 OLIG2Q13516 323 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 RUNX3Q13761 415 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 GRM2Q14416 872 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 HIF1AQ16665 826 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 KYNUQ16719 465 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 FUT11Q495W5 492 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 SPDYCQ5MJ68 293 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 DENND5AQ6IQ26 1287 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 RETSATQ6NUM9 610 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 RANBP10Q6VN20 620 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 PPP1R21Q6ZMI0 780 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 CEP128Q6ZU80 1094 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 CENPUQ71F23 418 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 TRMT10CQ7L0Y3 403 aaKnown RBP11.9□□□□□ -0.5
SPARC-207ENST00000537849 C12orf40Q86WS4 652 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 PDIK1LQ8N165 341 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.9□□□□□ -0.5
SPARC-207ENST00000537849 MRGPRX2Q96LB1 330 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 XPO6Q96QU8 1125 aaKnown RBP11.9□□□□□ -0.5
SPARC-207ENST00000537849 SEMA3CQ99985 751 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 MGME1Q9BQP7 344 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 WDR83Q9BRX9 315 aaKnown RBP11.9□□□□□ -0.5
SPARC-207ENST00000537849 XAB2Q9HCS7 855 aaKnown RBP11.9□□□□□ -0.5
SPARC-207ENST00000537849 CASS4Q9NQ75 786 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 NINJ2Q9NZG7 142 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 LHX3Q9UBR4 397 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 GGA2Q9UJY4 613 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 SLC27A6Q9Y2P4 619 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 TEX264Q9Y6I9 313 aa11.9□□□□□ -0.5
SPARC-207ENST00000537849 SZT2Q5T011 3432 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 SPTBN5Q9NRC6 3674 aaKnown RBP11.89□□□□□ -0.51
SPARC-207ENST00000537849 ARNTLO00327 626 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 TULP3O75386 442 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 NEBLO76041 1014 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 TTC4O95801 387 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 KCNA5P22460 613 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 CES1P23141 567 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 CD86P42081 329 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 WNT3AP56704 352 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 SARNPP82979 210 aaKnown RBP11.89□□□□□ -0.51
SPARC-207ENST00000537849 MESP2Q0VG99 397 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 NR1H3Q13133 447 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 MPP3Q13368 585 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 SMAD4Q13485 552 aaKnown RBP11.89□□□□□ -0.51
SPARC-207ENST00000537849 HTR4Q13639 388 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms