RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 UBAP1LF5GYI3 381 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 TRDMT1O14717 391 aaKnown RBP8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 EIF3DO15371 548 aaKnown RBP eCLIP8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 SH3BP5O60239 455 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 SYNCRIPO60506 623 aaKnown RBP8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 ICAM2P13598 275 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 ATF7P17544 494 aaPredicted RBP8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 CD58P19256 250 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 GLDCP23378 1020 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 GJC1P36383 396 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 EIF2DP41214 584 aaKnown RBP8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 HTR3AP46098 478 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 NUMBP49757 651 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 ABCE1P61221 599 aaKnown RBP8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 TNK2Q07912 1038 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 HMBOX1Q6NT76 420 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 FAM171BQ6P995 826 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 CHST15Q7LFX5 561 aaPredicted RBP8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 ERMP1Q7Z2K6 904 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 ZNF438Q7Z4V0 828 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 UNC45BQ8IWX7 931 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 CNTD1Q8N815 330 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 PSD4Q8NDX1 1056 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 LMO3Q8TAP4 145 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 FKBP10Q96AY3 582 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 MCRS1Q96EZ8 462 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 WDR83Q9BRX9 315 aaKnown RBP8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 POLMQ9NP87 494 aaPredicted RBP8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 NECTIN3Q9NQS3 549 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 MRPL39Q9NYK5 338 aaKnown RBP8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 MAT2BQ9NZL9 334 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 LAMB2P55268 1798 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 TRPC5OSA6NMA1 111 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 E7ENX8 843 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 DLGAP1O14490 977 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 TGFB1I1O43294 461 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 ARHGEF9O43307 516 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 NDUFA2O43678 99 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 NDUFS2O75306 463 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 PRKD3O94806 890 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 SLITRK5O94991 958 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 TALDO1P37837 337 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 PSMD8P48556 350 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 HARS2P49590 506 aaKnown RBP8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 SERPINB9P50453 376 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 OR2B6P58173 313 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 GHRHRQ02643 423 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 CHRNDQ07001 517 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 SNTA1Q13424 505 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 SQLEQ14534 574 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 DALRD3Q5D0E6 543 aaKnown RBP8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 ANKRD22Q5VYY1 191 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 XAF1Q6GPH4 301 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 IL17RDQ8NFM7 739 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 SLC16A10Q8TF71 515 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 EYA3Q99504 573 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 REEP2Q9BRK0 252 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 MCMBPQ9BTE3 642 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 ISCA1Q9BUE6 129 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 ACOXLQ9NUZ1 547 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 ACTR3BQ9P1U1 418 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 BAG5Q9UL15 447 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 MROH5Q6ZUA9 1318 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 TIPRLO75663 272 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 MAP3K6O95382 1288 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 PAHP00439 452 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 IFNA16P05015 189 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 FGFR2P21802 821 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 ARNTP27540 789 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 POLR2IP36954 125 aaKnown RBP8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 HK2P52789 917 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 RPL10AP62906 217 aaKnown RBP8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 GAD2Q05329 585 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 POLD3Q15054 466 aaPredicted RBP8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 IGSF11Q5DX21 431 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 KCNT2Q6UVM3 1135 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 BBS12Q6ZW61 710 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 ZNF767PQ75MW2 155 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 SLC47A2Q86VL8 602 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 RIOX2Q8IUF8 465 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 WDR49Q8IV35 697 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 SLCO4A1Q96BD0 722 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 TOE1Q96GM8 510 aaKnown RBP8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 TMEM80Q96HE8 168 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 SORT1Q99523 831 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 KCTD14Q9BQ13 255 aaPredicted RBP8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 PDZD7Q9H5P4 517 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 CPSF3Q9UKF6 684 aaKnown RBP8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 BOLA1Q9Y3E2 137 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 TBX22Q9Y458 520 aa8.63□□□□□ -1.03
SRGAP1-202ENST00000537556 SPATA31A5Q5VU36 1347 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 SPATA31A7Q8IWB4 1347 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 hCG_1984214I3L0E3 225 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 GLRA3O75311 464 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 SEMA3DO95025 777 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 CD4P01730 458 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 CYP11B1P15538 503 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 STMN1P16949 149 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 GAP43P17677 238 aa8.62□□□□□ -1.03
SRGAP1-202ENST00000537556 NPTX2P47972 431 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms