RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ADRB3P13945 408 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ITGB7P26010 798 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 L1CAMP32004 1257 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ABCG1P45844 678 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 CLDN2P57739 230 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 RPS21P63220 83 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ARF5P84085 180 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ARL13BQ3SXY8 428 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 TMEM259Q4ZIN3 620 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 KIAA1161Q6NSJ0 714 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 GCNT7Q6ZNI0 430 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ABI3BPQ7Z7G0 1075 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 CRELD1Q96HD1 420 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 FEM1CQ96JP0 617 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 UCKL1Q9NWZ5 548 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 OR12D3Q9UGF7 316 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 FCF1Q9Y324 198 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 HS3ST3A1Q9Y663 406 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 MGAQ8IWI9 3026 aa20.06■□□□□ 0.8
TNFRSF1B-204ENST00000536782 CXorf51AA0A1B0GTR3 108 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 A6NNZ2 444 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 FFAR2O15552 330 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 PIAS2O75928 621 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 GFPT2O94808 682 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 CYP1A1P04798 512 aaPredicted RBP20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ADRA1BP35368 520 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ETFBP38117 255 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 CCNHP51946 323 aaPredicted RBP20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 INSM1Q01101 510 aaPredicted RBP20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 MAPK8IP2Q13387 824 aaPredicted RBP20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 CDO1Q16878 200 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 Q6ZSR6 202 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 DCP2Q8IU60 420 aaKnown RBP20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 SLC22A18ASQ8N1D0 253 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 SLC20A1Q8WUM9 679 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 IFT43Q96FT9 208 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 SLC17A9Q9BYT1 436 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 TAB2Q9NYJ8 693 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 NOCTQ9UK39 431 aaKnown RBP20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 FADS3Q9Y5Q0 445 aa20.05■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ALPPL2P10696 532 aa20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 MMP8P22894 467 aa20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 SDC4P31431 198 aa20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 EIF2S3P41091 472 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 CDR2Q01850 454 aa20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 NRG1Q02297 640 aaPredicted RBP20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 RWDD4Q6NW29 188 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 LRRC69Q6ZNQ3 347 aa20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 PTAR1Q7Z6K3 402 aaPredicted RBP20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 DCBLD1Q8N8Z6 715 aa20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 RXFP2Q8WXD0 754 aa20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ISG20Q96AZ6 181 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 GANQ9H2C0 597 aa20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 RETREG1Q9H6L5 497 aa20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ZDHHC6Q9H6R6 413 aa20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ACTL7AQ9Y615 435 aa20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 CFAP46Q8IYW2 2715 aa20.04■□□□□ 0.8
TNFRSF1B-204ENST00000536782 TRPM6Q9BX84 2022 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 NEMP2A6NFY4 417 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 TLX3O43711 291 aaPredicted RBP20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 AP1G1O43747 822 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 CD160O95971 181 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 PAK4O96013 591 aaPredicted RBP20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 RHOQP17081 205 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ACVRL1P37023 503 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 MAPKAPK2P49137 400 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 GEMIN4P57678 1058 aaKnown RBP20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 C15orf59Q2T9L4 293 aaPredicted RBP20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 CCDC14Q49A88 953 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 RAB6CQ53S08 254 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 MANEALQ5VSG8 457 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 PARS2Q7L3T8 475 aaKnown RBP20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 TMC6Q7Z403 805 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 PHLDB2Q86SQ0 1253 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ZSCAN30Q86W11 494 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 PLPP6Q8IY26 295 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 RYBPQ8N488 228 aaPredicted RBP20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 BMFQ96LC9 184 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 TM6SF2Q9BZW4 377 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 RAB6CQ9H0N0 254 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 OSBPL2Q9H1P3 480 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 VPS16Q9H269 839 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 DNAJC28Q9NX36 388 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 NLGN3Q9NZ94 848 aa20.03■□□□□ 0.8
TNFRSF1B-204ENST00000536782 RRP8O43159 456 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 MT-CO3P00414 261 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 TPM2P07951 284 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 GIMD1P0DJR0 217 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 CKMT1AP12532 417 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ITPKBP27987 946 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 SOX5P35711 763 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 PTPN9P43378 593 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 POLR2FP61218 127 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 HNRNPKP61978 463 aaKnown RBP eCLIP20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 FMO1Q01740 532 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 SGCGQ13326 291 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 FGL2Q14314 439 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 ZNF542PQ5EBM4 170 aa20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 KYAT3Q6YP21 454 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1B-204ENST00000536782 KDM7AQ6ZMT4 941 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms