RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 PCDH19Q8TAB3 1148 aa13.79□□□□□ -0.2
RPAIN-205ENST00000536255 FOXJ1Q92949 421 aa13.79□□□□□ -0.2
RPAIN-205ENST00000536255 TCEAL3Q969E4 200 aa13.79□□□□□ -0.2
RPAIN-205ENST00000536255 RMDN1Q96DB5 314 aa13.79□□□□□ -0.2
RPAIN-205ENST00000536255 ZNF419Q96HQ0 510 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-205ENST00000536255 RNF157Q96PX1 679 aa13.79□□□□□ -0.2
RPAIN-205ENST00000536255 GPR174Q9BXC1 333 aa13.79□□□□□ -0.2
RPAIN-205ENST00000536255 SLC39A8Q9C0K1 460 aa13.79□□□□□ -0.2
RPAIN-205ENST00000536255 KLC2Q9H0B6 622 aa13.79□□□□□ -0.2
RPAIN-205ENST00000536255 PABPC3Q9H361 631 aaKnown RBP13.79□□□□□ -0.2
RPAIN-205ENST00000536255 SP110Q9HB58 689 aa13.79□□□□□ -0.2
RPAIN-205ENST00000536255 PILRBQ9UKJ0 227 aa13.79□□□□□ -0.2
RPAIN-205ENST00000536255 SCML1Q9UN30 329 aa13.79□□□□□ -0.2
RPAIN-205ENST00000536255 THADAQ6YHU6 1953 aa13.79□□□□□ -0.2
RPAIN-205ENST00000536255 A0A0U1RQJ8 604 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-205ENST00000536255 ZSCAN12O43309 604 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 GDF9O60383 454 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 MT-CO1P00395 513 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 CTNNA2P26232 953 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 ID4P47928 161 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 PAPOLAP51003 745 aaKnown RBP13.78□□□□□ -0.2
RPAIN-205ENST00000536255 RWDD2BP57060 319 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 SFSWAPQ12872 951 aaKnown RBP13.78□□□□□ -0.2
RPAIN-205ENST00000536255 TFDP2Q14188 446 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 PAFAH1B3Q15102 231 aaKnown RBP13.78□□□□□ -0.2
RPAIN-205ENST00000536255 CST6Q15828 149 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 RSPO4Q2I0M5 234 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-205ENST00000536255 INO80DQ53TQ3 878 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-205ENST00000536255 SYCP2LQ5T4T6 812 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 C22orf39Q6P5X5 142 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 USP30Q70CQ3 517 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 NT5DC3Q86UY8 548 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 MMAAQ8IVH4 418 aaKnown RBP13.78□□□□□ -0.2
RPAIN-205ENST00000536255 CCDC50Q8IVM0 306 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 ARHGAP12Q8IWW6 846 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 ATPAF2Q8N5M1 289 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 PCDH20Q8N6Y1 951 aaKnown RBP13.78□□□□□ -0.2
RPAIN-205ENST00000536255 NPWQ8N729 165 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 CADM4Q8NFZ8 388 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 NETO1Q8TDF5 533 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 OR8D1Q8WZ84 308 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 ISG20Q96AZ6 181 aaKnown RBP13.78□□□□□ -0.2
RPAIN-205ENST00000536255 RNF25Q96BH1 459 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-205ENST00000536255 ZNF830Q96NB3 372 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-205ENST00000536255 FAM129BQ96TA1 746 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 PCED1AQ9H1Q7 454 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 LZTFL1Q9NQ48 299 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 TMEM74BQ9NUR3 256 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 ETNK2Q9NVF9 386 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 UBA2Q9UBT2 640 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-205ENST00000536255 CDV3Q9UKY7 258 aaKnown RBP13.78□□□□□ -0.2
RPAIN-205ENST00000536255 PCDHA3Q9Y5H8 950 aa13.78□□□□□ -0.2
RPAIN-205ENST00000536255 ATXN2Q99700 1313 aaKnown RBP13.78□□□□□ -0.2
RPAIN-205ENST00000536255 C3orf70A6NLC5 250 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-205ENST00000536255 MEI4A8MW99 385 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 PATE3B3GLJ2 98 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 APOL1O14791 398 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 KHNYNO15037 678 aaKnown RBP13.77□□□□□ -0.21
RPAIN-205ENST00000536255 ALOX15BO15296 676 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 MID1O15344 667 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 PRAMEF11O60813 436 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 ADH1BP00325 375 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 MX2P20592 715 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 SDHBP21912 280 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 ACSL1P33121 698 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 PSMD8P48556 350 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 COPS2P61201 443 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 IL10RBQ08334 325 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 RFTN1Q14699 578 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-205ENST00000536255 TFDP3Q5H9I0 405 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 WDR45BQ5MNZ6 344 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 TMCO4Q5TGY1 634 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 NCBP2-AS2Q69YL0 99 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 MFSD7Q6UXD7 560 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 Q6ZVU0 165 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 BZW1Q7L1Q6 419 aaKnown RBP13.77□□□□□ -0.21
RPAIN-205ENST00000536255 RFX6Q8HWS3 928 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 PLPP6Q8IY26 295 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 TRIM58Q8NG06 486 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 NSMCE1Q8WV22 266 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 KRT35Q92764 455 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 BTBD1Q9H0C5 482 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 RXFP3Q9NSD7 469 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 FBXL12Q9NXK8 326 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 DLL3Q9NYJ7 618 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 EVLQ9UI08 416 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-205ENST00000536255 IPO11Q9UI26 975 aaKnown RBP13.77□□□□□ -0.21
RPAIN-205ENST00000536255 NCKAP1Q9Y2A7 1128 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 CAPN6Q9Y6Q1 641 aa13.77□□□□□ -0.21
RPAIN-205ENST00000536255 CEP250Q9BV73 2442 aa13.76□□□□□ -0.21
RPAIN-205ENST00000536255 CHD5Q8TDI0 1954 aa13.76□□□□□ -0.21
RPAIN-205ENST00000536255 TNRC6BQ9UPQ9 1833 aaKnown RBP13.76□□□□□ -0.21
RPAIN-205ENST00000536255 LNP1A1A4G5 178 aa13.76□□□□□ -0.21
RPAIN-205ENST00000536255 K7ERQ8 282 aa13.76□□□□□ -0.21
RPAIN-205ENST00000536255 MCF2LO15068 1137 aa13.76□□□□□ -0.21
RPAIN-205ENST00000536255 SMAD6O43541 496 aaKnown RBP13.76□□□□□ -0.21
RPAIN-205ENST00000536255 MFSD11O43934 449 aa13.76□□□□□ -0.21
RPAIN-205ENST00000536255 BNIP3LO60238 219 aa13.76□□□□□ -0.21
RPAIN-205ENST00000536255 FTCDO95954 541 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms