RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 TIMM44O43615 452 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 MAGEC1O60732 1142 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 VNN2O95498 520 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 SERPINE1P05121 402 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 SERPINA6P08185 405 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 SLC2A3P11169 496 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 CPA3P15088 417 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 YWHAQP27348 245 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 GABRB3P28472 473 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 PGM1P36871 562 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 PBX3P40426 434 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 CHRNA4P43681 627 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 RAP1GDS1P52306 607 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 CCDC153Q494R4 210 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 RASIP1Q5U651 963 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 ZNF280DQ6N043 979 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 ESRP1Q6NXG1 681 aaKnown RBP13.56□□□□□ -0.24
VPS33B-202ENST00000535906 RANBP10Q6VN20 620 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 ZC3HC1Q86WB0 502 aaKnown RBP13.56□□□□□ -0.24
VPS33B-202ENST00000535906 UMODL1-AS1Q8N2C9 162 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 ARHGAP18Q8N392 663 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 FBXO32Q969P5 355 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 SORT1Q99523 831 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 FSD1LQ9BXM9 530 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 CREBZFQ9NS37 354 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 SLC2A6Q9UGQ3 507 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 SLC39A10Q9ULF5 831 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 KIF3CO14782 793 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 VAPBO95292 243 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 AHSGP02765 367 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 ALDH2P05091 517 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 MPOP05164 745 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 HAPLN1P10915 354 aaPredicted RBP13.56□□□□□ -0.24
VPS33B-202ENST00000535906 RALBP11234 206 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 COL6A1P12109 1028 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 CPB1P15086 417 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 ATP6V1C1P21283 382 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 FGFR3P22607 806 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 ARNTP27540 789 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 CPA2P48052 419 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 SLC11A1P49279 550 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 TAF10Q12962 218 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 ITGA9Q13797 1035 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 RCN1Q15293 331 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 TCTN1Q2MV58 587 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 RNF19BQ6ZMZ0 732 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 LRRC49Q8IUZ0 686 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 WDR75Q8IWA0 830 aaKnown RBP13.56□□□□□ -0.24
VPS33B-202ENST00000535906 WDR60Q8WVS4 1066 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 HMCESQ96FZ2 354 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 RILPQ96NA2 401 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 ZYG11BQ9C0D3 744 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 ELAC1Q9H777 363 aaKnown RBP13.56□□□□□ -0.24
VPS33B-202ENST00000535906 ENTPD7Q9NQZ7 604 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.56□□□□□ -0.24
VPS33B-202ENST00000535906 SORCS3Q9UPU3 1222 aa13.56□□□□□ -0.24
VPS33B-202ENST00000535906 MTMR11A4FU01 709 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 OR6C75A6NL08 312 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 G3V2L1 256 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 NEBLO76041 1014 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 PSMG1O95456 288 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 ARCN1P48444 511 aaKnown RBP13.55□□□□□ -0.24
VPS33B-202ENST00000535906 CSRP3P50461 194 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 ALDH18A1P54886 795 aaKnown RBP13.55□□□□□ -0.24
VPS33B-202ENST00000535906 CTBP1Q13363 440 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 CCDC6Q16204 474 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 PCSK7Q16549 785 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 DEFB115Q30KQ5 88 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 MGAT5BQ3V5L5 792 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 RTP2Q5QGT7 225 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 DENND6AQ8IWF6 608 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 OR6Y1Q8NGX8 325 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 IGSF8Q969P0 613 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 GPR22Q99680 433 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 SEPT5Q99719 369 aaPredicted RBP13.55□□□□□ -0.24
VPS33B-202ENST00000535906 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.55□□□□□ -0.24
VPS33B-202ENST00000535906 STN1Q9H668 368 aaKnown RBP13.55□□□□□ -0.24
VPS33B-202ENST00000535906 GPBP1L1Q9HC44 474 aaPredicted RBP13.55□□□□□ -0.24
VPS33B-202ENST00000535906 TMEM248Q9NWD8 314 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 GREB1Q4ZG55 1949 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.55□□□□□ -0.24
VPS33B-202ENST00000535906 SPECC1L-ADORA2AF8WAN1 911 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 KRT36O76013 467 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 HMBSP08397 361 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 RHOQP17081 205 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 SAT1P21673 171 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 GRK2P25098 689 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 VHLP40337 213 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 NDST2P52849 883 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 MAXP61244 160 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 SLC10A7Q0GE19 358 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 BLMHQ13867 455 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 RCN2Q14257 317 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 CNGA3Q16281 694 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 TSNAXIP1Q2TAA8 658 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 ANO4Q32M45 955 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 C10orf120Q5SQS8 335 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 RAP1GAP2Q684P5 730 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 FBXL22Q6P050 247 aa13.55□□□□□ -0.24
VPS33B-202ENST00000535906 POTEHQ6S545 545 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms