RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	MCRS1	Q96EZ8	462 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	APOPT1	Q96IL0	206 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	C12orf42	Q96LP6	360 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	SEMA4A	Q9H3S1	761 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	TMBIM4	Q9HC24	238 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	LRRC14B	A6NHZ5	514 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	AGMO	Q6ZNB7	445 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	ATG16L2	Q8NAA4	619 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	DBF4B	Q8NFT6	615 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	MYCBPAP	Q8TBZ2	947 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	EXOC2	Q96KP1	924 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	FERD3L	Q96RJ6	166 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	SH3BGRL	O75368	114 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	MYBL2	P10244	700 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	ADRA1D	P25100	572 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	CORO1A	P31146	461 aa	Known RBP	15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	TRIP4	Q15650	581 aa	Predicted RBP	15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	ILDR1	Q86SU0	546 aa	Predicted RBP	15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	EFCAB3	Q8N7B9	438 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	GLIS3	Q8NEA6	775 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	TRIT1	Q9H3H1	467 aa	Known RBP	15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	POMK	Q9H5K3	350 aa		15.91	■□□□□ 0.14
NCAPD3-213	ENST00000534532	PAGE1	O75459	146 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	EPHX1	P07099	455 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	RAD23A	P54725	363 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	TRIM60	Q495X7	471 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	GPR135	Q8IZ08	494 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	USP6NL	Q92738	828 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	FEM1C	Q96JP0	617 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	ADPRHL2	Q9NX46	363 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	GMIP	Q9P107	970 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	GULP1	Q9UBP9	304 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	RIPK2	O43353	540 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	OR10H2	O60403	315 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	TSPAN1	O60635	241 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	PRNP	P04156	253 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	OR4Q2	P0C623	313 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	GOT1	P17174	413 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	NEK2	P51955	445 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	NOMO3	P69849	1222 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	SLC25A52	Q3SY17	297 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	POLN	Q7Z5Q5	900 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	KRT73	Q86Y46	540 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	KIF2B	Q8N4N8	673 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	PPP1R14A	Q96A00	147 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	COL26A1	Q96A83	441 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	TMEM120A	Q9BXJ8	343 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	RPRD1B	Q9NQG5	326 aa	Known RBP	15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	ZC4H2	Q9NQZ6	224 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	THAP1	Q9NVV9	213 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	DUS2	Q9NX74	493 aa	Known RBP	15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	KL	Q9UEF7	1012 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	TAGLN3	Q9UI15	199 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	SIK3	Q9Y2K2	1263 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	PRR23D1	E9PI22	279 aa	Predicted RBP	15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	PRR23D2	P0DMB1	279 aa	Predicted RBP	15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	COX7A2	P14406	83 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	CTPS1	P17812	591 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	IRAK1	P51617	712 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	PTPRN	Q16849	979 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	CCDC81	Q6ZN84	652 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	PHYKPL	Q8IUZ5	450 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	ERVW-1	Q9UQF0	538 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	ASF1A	Q9Y294	204 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	SOWAHB	A6NEL2	793 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	CCDC154	A6NI56	674 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	RPL21	P46778	160 aa	Known RBP	15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	TTC33	Q6PID6	262 aa	Predicted RBP	15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	TRPC4AP	Q8TEL6	797 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	PLK2	Q9NYY3	685 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	PCDHA11	Q9Y5I1	949 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	MED1	Q15648	1581 aa	Predicted RBP	15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	NFKBIE	O00221	500 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	UMPS	P11172	480 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	IFNGR2	P38484	337 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	TLE2	Q04725	743 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	RAB30	Q15771	203 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	LRRC55	Q6ZSA7	311 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	CHST9	Q7L1S5	443 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	OR10G6	Q8NH81	332 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	MYO19	Q96H55	970 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	CLIC5	Q9NZA1	410 aa		15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	HECA	Q9UBI9	543 aa	Predicted RBP	15.9	■□□□□ 0.14
NCAPD3-213	ENST00000534532	LRRC72	A6NJI9	287 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	TEAD4	Q15561	434 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ALG11	Q2TAA5	492 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	HYI	Q5T013	277 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	NPNT	Q6UXI9	565 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ZCCHC9	Q8N567	271 aa	Known RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	PDZD7	Q9H5P4	517 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ZDHHC4	Q9NPG8	344 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	INTS7	Q9NVH2	962 aa	Known RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	NDRG2	Q9UN36	371 aa	Known RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	MRPS33	Q9Y291	106 aa	Known RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	MAFB	Q9Y5Q3	323 aa	Predicted RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	SLIT3	O75094	1523 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	FZD9	O00144	591 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ERN1	O75460	977 aa	Known RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	RNASEH2A	O75792	299 aa	Known RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	TARS	P26639	723 aa	Known RBP	15.89	■□□□□ 0.13

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms