RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 USP6NLQ92738 828 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 CENPTQ96BT3 561 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 GCC1Q96CN9 775 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 VMP1Q96GC9 406 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 EPSTI1Q96J88 318 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 PRAM1Q96QH2 718 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 OSBPL10Q9BXB5 764 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 CAPS2Q9BXY5 557 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 ADGRE3Q9BY15 652 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 RNF26Q9BY78 433 aaPredicted RBP4.51□□□□□ -1.69
ITGB1-219ENST00000534049 SLC25A32Q9H2D1 315 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 CCDC68Q9H2F9 335 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 ZWILCHQ9H900 591 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 USP29Q9HBJ7 922 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 PAPOLBQ9NRJ5 636 aaKnown RBP4.51□□□□□ -1.69
ITGB1-219ENST00000534049 DCAF16Q9NXF7 216 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 MAP3K20Q9NYL2 800 aaKnown RBP4.51□□□□□ -1.69
ITGB1-219ENST00000534049 MIS18AQ9NYP9 233 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 GGA2Q9UJY4 613 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 SATB2Q9UPW6 733 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 AFG3L2Q9Y4W6 797 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.51□□□□□ -1.69
ITGB1-219ENST00000534049 SQORQ9Y6N5 450 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 ARHGEF10O15013 1369 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 TONSLQ96HA7 1378 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 ZMYM2Q9UBW7 1377 aa4.51□□□□□ -1.69
ITGB1-219ENST00000534049 LRP5O75197 1615 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 KIF7Q2M1P5 1343 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 FNDC1Q4ZHG4 1894 aaPredicted RBP4.5□□□□□ -1.69
ITGB1-219ENST00000534049 GOLGA6L7A0A1B0GV03 622 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 RHPN2P1A8MT19 583 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 AGPSO00116 658 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 EIF3FO00303 357 aaPredicted RBP4.5□□□□□ -1.69
ITGB1-219ENST00000534049 AREL1O15033 823 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 LSM1O15116 133 aaKnown RBP4.5□□□□□ -1.69
ITGB1-219ENST00000534049 WDR46O15213 610 aaKnown RBP4.5□□□□□ -1.69
ITGB1-219ENST00000534049 CCNT2O60583 730 aaKnown RBP4.5□□□□□ -1.69
ITGB1-219ENST00000534049 CNOT3O75175 753 aaKnown RBP4.5□□□□□ -1.69
ITGB1-219ENST00000534049 WDR47O94967 919 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 ADCY5O95622 1261 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 TGFB3P10600 412 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 IDEP14735 1019 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 ATF7P17544 494 aaPredicted RBP4.5□□□□□ -1.69
ITGB1-219ENST00000534049 SLC5A2P31639 672 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 MATR3P43243 847 aaKnown RBP eCLIP4.5□□□□□ -1.691e-6■■■■□ 21.4
ITGB1-219ENST00000534049 JAK3P52333 1124 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 HTRA4P83105 476 aaPredicted RBP4.5□□□□□ -1.69
ITGB1-219ENST00000534049 CFHR1Q03591 330 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 IKQ13123 557 aaPredicted RBP4.5□□□□□ -1.69
ITGB1-219ENST00000534049 SNX1Q13596 522 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 KCNAB1Q14722 419 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 BRD3Q15059 726 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 PTPN14Q15678 1187 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 SLC9C1Q4G0N8 1177 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 BEND5Q7L4P6 421 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 P3H2Q8IVL5 708 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 ARL6IP6Q8N6S5 226 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 ARL10Q8N8L6 244 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 C11orf44Q8N8P7 122 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 RASSF8Q8NHQ8 419 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 BCAS4Q8TDM0 211 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 ABHD5Q8WTS1 349 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 GTF3C6Q969F1 213 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 CDHR1Q96JP9 859 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 NEK1Q96PY6 1258 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 SMC6Q96SB8 1091 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 TSC22D3Q99576 134 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 CGREF1Q99674 301 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 SPRTNQ9H040 489 aaPredicted RBP4.5□□□□□ -1.69
ITGB1-219ENST00000534049 ZNF304Q9HCX3 659 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 ARFGAP3Q9NP61 516 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 DDX21Q9NR30 783 aaKnown RBP eCLIP4.5□□□□□ -1.69
ITGB1-219ENST00000534049 RXFP3Q9NSD7 469 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 TRMT1Q9NXH9 659 aaKnown RBP4.5□□□□□ -1.69
ITGB1-219ENST00000534049 UBAP1Q9NZ09 502 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 TUBGCP4Q9UGJ1 667 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 TRPC5Q9UL62 973 aaPredicted RBP4.5□□□□□ -1.69
ITGB1-219ENST00000534049 PRELID1Q9Y255 219 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 POLR3AO14802 1390 aaPredicted RBP4.5□□□□□ -1.69
ITGB1-219ENST00000534049 GPRASP1Q5JY77 1395 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 TRPM1Q7Z4N2 1603 aa4.5□□□□□ -1.69
ITGB1-219ENST00000534049 BRWD3Q6RI45 1802 aa4.49□□□□□ -1.69
ITGB1-219ENST00000534049 DISP2A7MBM2 1401 aa4.49□□□□□ -1.69
ITGB1-219ENST00000534049 BLMP54132 1417 aaPredicted RBP4.49□□□□□ -1.69
ITGB1-219ENST00000534049 PIK3C2AO00443 1686 aa4.49□□□□□ -1.69
ITGB1-219ENST00000534049 QRICH2Q9H0J4 1663 aa4.49□□□□□ -1.69
ITGB1-219ENST00000534049 EFCAB8A8MWE9 144 aa4.49□□□□□ -1.69
ITGB1-219ENST00000534049 B4DLN1 442 aa4.49□□□□□ -1.69
ITGB1-219ENST00000534049 H0YC42 278 aa4.49□□□□□ -1.69
ITGB1-219ENST00000534049 IKBKBO14920 756 aa4.49□□□□□ -1.69
ITGB1-219ENST00000534049 ZSCAN12O43309 604 aa4.49□□□□□ -1.69
ITGB1-219ENST00000534049 TLR2O60603 784 aa4.49□□□□□ -1.69
ITGB1-219ENST00000534049 PARNO95453 639 aaKnown RBP4.49□□□□□ -1.69
ITGB1-219ENST00000534049 EIF2S1P05198 315 aaKnown RBP4.49□□□□□ -1.69
ITGB1-219ENST00000534049 TMIGD3P0DMS9 266 aaPredicted RBP4.49□□□□□ -1.69
ITGB1-219ENST00000534049 CASTP20810 708 aaKnown RBP4.49□□□□□ -1.69
ITGB1-219ENST00000534049 MATN1P21941 496 aa4.49□□□□□ -1.69
ITGB1-219ENST00000534049 S100A1P23297 94 aa4.49□□□□□ -1.69
ITGB1-219ENST00000534049 PIK3CAP42336 1068 aa4.49□□□□□ -1.69
ITGB1-219ENST00000534049 PSMC4P43686 418 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms