RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 METTL3Q86U44 580 aaKnown RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 KCNMB4Q86W47 210 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 RIOX2Q8IUF8 465 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 TMEM86AQ8N2M4 240 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 PYDC1Q8WXC3 89 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 ISL2Q96A47 359 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 RCN3Q96D15 328 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 FAM120BQ96EK7 910 aaKnown RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 WDR18Q9BV38 432 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 CCDC90BQ9GZT6 254 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 PRDM8Q9NQV8 689 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 ARMCX1Q9P291 453 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 PAPSS2O95340 614 aaPredicted RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 TFAP2AP05549 437 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 HIST1H2AGP0C0S8 130 aaPredicted RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 NPR3P17342 541 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 HIST1H2ADP20671 130 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 ICAM3P32942 547 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 PNLIPRP1P54315 467 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 PSMC6P62333 389 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 SCN1BQ07699 218 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 CEP78Q5JTW2 689 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 BRMS1LQ5PSV4 323 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 SHQ1Q6PI26 577 aaKnown RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 RNF139Q8WU17 664 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 CRYGNQ8WXF5 182 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 LENG9Q96B70 501 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 HIST1H2AHQ96KK5 128 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 SIGLEC10Q96LC7 697 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 ZNF597Q96LX8 424 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 MIPEPQ99797 713 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 HIST1H2AJQ99878 128 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 RBM4BQ9BQ04 359 aaKnown RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 APOL2Q9BQE5 337 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 H2AFJQ9BTM1 129 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 RBM4Q9BWF3 364 aaKnown RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 EBF3Q9H4W6 596 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 RUBCNLQ9H714 662 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 MOCS1Q9NZB8 636 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 SEPT10Q9P0V9 454 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 SLC17A7Q9P2U7 560 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 VANGL2Q9ULK5 521 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 ATRNL1Q5VV63 1379 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 PHRF1Q9P1Y6 1649 aaKnown RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 ATMINO43313 823 aaPredicted RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 PRPS2P11908 318 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 PABPC1P11940 636 aaKnown RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 HALP42357 657 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 GNG2P59768 71 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 MYBPC1Q00872 1141 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 MERTKQ12866 999 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 LCP2Q13094 533 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 KCNJ11Q14654 390 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 SNAP47Q5SQN1 464 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 SLC9A4Q6AI14 798 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 BHLHE22Q8NFJ8 381 aaPredicted RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 C15orf40Q8WUR7 153 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 UCMAQ8WVF2 138 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 LENG8Q96PV6 779 aaPredicted RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 SMYD2Q9NRG4 433 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 OXSMQ9NWU1 459 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 TAS2R14Q9NYV8 317 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 SAMD4AQ9UPU9 718 aaKnown RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 CAB39Q9Y376 341 aaPredicted RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 MAGED1Q9Y5V3 778 aaPredicted RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 DUOX1Q9NRD9 1551 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 CNTNAP1P78357 1384 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 CCDC195A0A1B0GUA6 201 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 F8VP50 259 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 ZBTB48P10074 688 aaPredicted RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 THRBP10828 461 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 NOS2P35228 1153 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 MAP3K7CLP57077 242 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 YBEYP58557 167 aaPredicted RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 DNAJB13P59910 316 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 IRF5Q13568 498 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 STYK1Q6J9G0 422 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 SWSAP1Q6NVH7 229 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 BEND5Q7L4P6 421 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 MAEAQ7L5Y9 396 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 FAM126BQ8IXS8 530 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 NR4A3Q92570 626 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 MRPL48Q96GC5 212 aaKnown RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 COG4Q9H9E3 785 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 POPDC2Q9HBU9 364 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 AGO4Q9HCK5 861 aaKnown RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 CCM2LQ9NUG4 571 aaPredicted RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 ZIM2Q9NZV7 527 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 NKRFO15226 690 aaKnown RBP eCLIP4.09□□□□□ -1.75
SOX6-217ENST00000533870 MAGEB3O15480 346 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 DYRK3O43781 588 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 ERN1O75460 977 aaKnown RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 ENDOD1O94919 500 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 ARHGEF15O94989 841 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 ENO2P09104 434 aaPredicted RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 NCF1P14598 390 aaPredicted RBP4.09□□□□□ -1.75
SOX6-217ENST00000533870 CYP2F1P24903 491 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 CHRNA5P30532 468 aa4.09□□□□□ -1.75
SOX6-217ENST00000533870 GALK1P51570 392 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms