RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 STAP1Q9ULZ2 295 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 PSMD13Q9UNM6 376 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 TNS1Q9HBL0 1735 aaKnown RBP19.62■□□□□ 0.73
CAPN1-226ENST00000533820 RGSL1A5PLK6 1076 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 DCLK1O15075 740 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 MT-CYBP00156 380 aaPredicted RBP19.62■□□□□ 0.73
CAPN1-226ENST00000533820 HDCP19113 662 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 NUMBP49757 651 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 NAB1Q13506 487 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 DCAF4L1Q3SXM0 396 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 LILRA2Q8N149 483 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 CYP4F12Q9HCS2 524 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 STK39Q9UEW8 545 aa19.62■□□□□ 0.73
CAPN1-226ENST00000533820 GRID2O43424 1007 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 PEX1O43933 1283 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 HNRNPLP14866 589 aaKnown RBP eCLIP19.61■□□□□ 0.73
CAPN1-226ENST00000533820 MAMDC4Q6UXC1 1216 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 GPRIN1Q7Z2K8 1008 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 FSTL5Q8N475 847 aaPredicted RBP19.61■□□□□ 0.73
CAPN1-226ENST00000533820 ZFP42Q96MM3 310 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 PRPF18Q99633 342 aaKnown RBP19.61■□□□□ 0.73
CAPN1-226ENST00000533820 RHOBTB2Q9BYZ6 727 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 SIK2Q9H0K1 926 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 WDR41Q9HAD4 459 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 XPR1Q9UBH6 696 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 UBQLN1Q9UMX0 589 aaKnown RBP19.61■□□□□ 0.73
CAPN1-226ENST00000533820 ASB14A6NK59 587 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 XPO1O14980 1071 aaKnown RBP19.61■□□□□ 0.73
CAPN1-226ENST00000533820 DNAJA2O60884 412 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 VAPBO95292 243 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 CRTAMO95727 393 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 SBK3P0C264 359 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 FGFR3P22607 806 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 NRF1Q16656 503 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 GRAMD4Q6IC98 578 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 RBM44Q6ZP01 1051 aaKnown RBP19.61■□□□□ 0.73
CAPN1-226ENST00000533820 CEP70Q8NHQ1 597 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 TMEM40Q8WWA1 233 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 DCPSQ96C86 337 aaKnown RBP19.61■□□□□ 0.73
CAPN1-226ENST00000533820 AP4B1Q9Y6B7 739 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 WDR90Q96KV7 1748 aa19.61■□□□□ 0.73
CAPN1-226ENST00000533820 A0A1B0GTW7 788 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 CSPG5O95196 566 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 MPOP05164 745 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 NFKBIAP25963 317 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 TAF6P49848 677 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 MAP3K21Q5TCX8 1036 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 RWDD4Q6NW29 188 aaKnown RBP19.6■□□□□ 0.73
CAPN1-226ENST00000533820 NOTUMQ6P988 496 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 POTEAQ6S8J7 498 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 CLEC14AQ86T13 490 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 PPTC7Q8NI37 304 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 NXNL1Q96CM4 212 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 PKP2Q99959 881 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 DUSP16Q9BY84 665 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 PLEKHA5Q9HAU0 1116 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 GTSE1Q9NYZ3 720 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 GTF2IRD1Q9UHL9 959 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 LZTS1Q9Y250 596 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 DAB1O75553 588 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 FYNP06241 537 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 NPR3P17342 541 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 IREB2P48200 963 aaKnown RBP19.6■□□□□ 0.73
CAPN1-226ENST00000533820 PLK1P53350 603 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 PHEXP78562 749 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 SNAPC2Q13487 334 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 PAFAH1B3Q15102 231 aaKnown RBP19.6■□□□□ 0.73
CAPN1-226ENST00000533820 OGFRL1Q5TC84 451 aaPredicted RBP19.6■□□□□ 0.73
CAPN1-226ENST00000533820 LAYNQ6UX15 382 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 ARHGAP36Q6ZRI8 547 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 GK5Q6ZS86 529 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 CLEC20AQ6ZU45 233 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 PAQR9Q6ZVX9 377 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 ERO1BQ86YB8 467 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 IPMKQ8NFU5 416 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 RNF34Q969K3 372 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 SERPINI1Q99574 410 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 RAP2CQ9Y3L5 183 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 CLPTM1O96005 669 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 CYP2B6P20813 491 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 DNAJB3Q8WWF6 145 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 LZICQ8WZA0 190 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 TNIP3Q96KP6 325 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 ADAM28Q9UKQ2 775 aa19.6■□□□□ 0.73
CAPN1-226ENST00000533820 DFFAO00273 331 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 PIRO00625 290 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 TIMM44O43615 452 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 AHSGP02765 367 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 PABPC4LP0CB38 370 aaKnown RBP19.59■□□□□ 0.73
CAPN1-226ENST00000533820 GABRB3P28472 473 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 MAGEA12P43365 314 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 LILRA4P59901 499 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 RARS2Q5T160 578 aaKnown RBP19.59■□□□□ 0.73
CAPN1-226ENST00000533820 KIAA0319Q5VV43 1072 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 CEP97Q8IW35 865 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 PCDHAC1Q9H158 963 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 CASS4Q9NQ75 786 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 RCOR3Q9P2K3 495 aaPredicted RBP19.59■□□□□ 0.73
CAPN1-226ENST00000533820 CDYLQ9Y232 598 aa19.59■□□□□ 0.73
CAPN1-226ENST00000533820 DLX3O60479 287 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms