RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 GRIN3AQ8TCU5 1115 aa16.12■□□□□ 0.17
TSKU-204ENST00000533752 RMDN1Q96DB5 314 aa16.12■□□□□ 0.17
TSKU-204ENST00000533752 GDAP1L1Q96MZ0 367 aa16.12■□□□□ 0.17
TSKU-204ENST00000533752 CSPG4P5Q96PW8 444 aa16.12■□□□□ 0.17
TSKU-204ENST00000533752 MIR1-1HGQ9H1L0 117 aa16.12■□□□□ 0.17
TSKU-204ENST00000533752 CAPN10Q9HC96 672 aa16.12■□□□□ 0.17
TSKU-204ENST00000533752 PCDH18Q9HCL0 1135 aa16.12■□□□□ 0.17
TSKU-204ENST00000533752 TMEM9BQ9NQ34 198 aa16.12■□□□□ 0.17
TSKU-204ENST00000533752 UBA2Q9UBT2 640 aaPredicted RBP16.12■□□□□ 0.17
TSKU-204ENST00000533752 FAM47DPA6NHR8 397 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 BCAT2O15382 392 aaPredicted RBP16.11■□□□□ 0.17
TSKU-204ENST00000533752 PLRG1O43660 514 aaKnown RBP16.11■□□□□ 0.17
TSKU-204ENST00000533752 PRAMEF11O60813 436 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 IPO7O95373 1038 aaKnown RBP16.11■□□□□ 0.17
TSKU-204ENST00000533752 IGSF6O95976 241 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 CTSLP07711 333 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 CD27P26842 260 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 CDC25BP30305 580 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 NUDT1P36639 197 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 CCR5P51681 352 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 ATXN3P54252 364 aaPredicted RBP16.11■□□□□ 0.17
TSKU-204ENST00000533752 IRX4P78413 519 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 CNTN1Q12860 1018 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 NUMA1Q14980 2115 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 TCEAL1Q15170 157 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 SPA17Q15506 151 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 STPG1Q5TH74 334 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 AGBL4Q5VU57 503 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 AFMIDQ63HM1 303 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.11■□□□□ 0.17
TSKU-204ENST00000533752 RYBPQ8N488 228 aaPredicted RBP16.11■□□□□ 0.17
TSKU-204ENST00000533752 CHST14Q8NCH0 376 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 BIRC7Q96CA5 298 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 CELF6Q96J87 481 aaKnown RBP16.11■□□□□ 0.17
TSKU-204ENST00000533752 OSBPL1AQ9BXW6 950 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 HDAC8Q9BY41 377 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 TM6SF2Q9BZW4 377 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 ZDHHC5Q9C0B5 715 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 SP110Q9HB58 689 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 OSGEPQ9NPF4 335 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 HECAQ9UBI9 543 aaPredicted RBP16.11■□□□□ 0.17
TSKU-204ENST00000533752 EIF2B4Q9UI10 523 aaKnown RBP16.11■□□□□ 0.17
TSKU-204ENST00000533752 WASF2Q9Y6W5 498 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 CACNA1EQ15878 2313 aa16.11■□□□□ 0.17
TSKU-204ENST00000533752 GOLGA6L6A8MZA4 724 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 GDF9O60383 454 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 LEFTY1O75610 366 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 LCA5LO95447 670 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 ITGB7P26010 798 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 MAOBP27338 520 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 AFF3P51826 1226 aaKnown RBP16.1■□□□□ 0.17
TSKU-204ENST00000533752 CDH6P55285 790 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 RHOAP61586 193 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 RAD51Q06609 339 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 RFTN1Q14699 578 aaPredicted RBP16.1■□□□□ 0.17
TSKU-204ENST00000533752 PDK2Q15119 407 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 TEAD4Q15561 434 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 POM121L1PQ3SYA9 428 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 ARSIQ5FYB1 569 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 TMTC1Q8IUR5 882 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 MAP7D3Q8IWC1 876 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 NPWQ8N729 165 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 FAM71BQ8TC56 605 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 TSC1Q92574 1164 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 ZNF670Q9BS34 389 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 SLC39A8Q9C0K1 460 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 KLC2Q9H0B6 622 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 ZDHHC6Q9H6R6 413 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 PDFQ9HBH1 243 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 PREBQ9HCU5 417 aa16.1■□□□□ 0.17
TSKU-204ENST00000533752 PI4KAP42356 2102 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 TBC1D3DA0A087WVF3 549 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 TBC1D3IA0A087WXS9 549 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 TBC1D3EA0A087X179 549 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 TBC1D3KA0A087X1G2 549 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 TBC1D3FA6NER0 549 aaPredicted RBP16.09■□□□□ 0.17
TSKU-204ENST00000533752 TBC1D3LB9A6J9 549 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 DFFAO00273 331 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 ARHGAP33O14559 1287 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 POP4O95707 220 aaKnown RBP16.09■□□□□ 0.17
TSKU-204ENST00000533752 IGHV4-34P06331 123 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 TBC1D3HP0C7X1 549 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 ENGP17813 658 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 FECHP22830 423 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 GJC1P36383 396 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 MAGEA1P43355 309 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 PAPOLAP51003 745 aaKnown RBP16.09■□□□□ 0.17
TSKU-204ENST00000533752 NEK3P51956 506 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 METAP1P53582 386 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 MESDQ14696 234 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 GRM3Q14832 879 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 PIP5KL1Q5T9C9 394 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 TBC1D3GQ6DHY5 549 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 TXNRD3NBQ6F5E7 133 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 TBC1D3CQ6IPX1 549 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 NEK5Q6P3R8 708 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 IL27RAQ6UWB1 636 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 LEKR1Q6ZMV7 388 aa16.09■□□□□ 0.17
TSKU-204ENST00000533752 ERN2Q76MJ5 926 aaKnown RBP16.09■□□□□ 0.17
TSKU-204ENST00000533752 TRIM69Q86WT6 500 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms