RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CXorf51AA0A1B0GTR3 108 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 CCP110O43303 1012 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 ZNF821O75541 412 aaPredicted RBP15.74■□□□□ 0.11
CPSF1-211ENST00000533492 L1CAMP32004 1257 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 CCNHP51946 323 aaPredicted RBP15.74■□□□□ 0.11
CPSF1-211ENST00000533492 RPL7AP62424 266 aaKnown RBP15.74■□□□□ 0.11
CPSF1-211ENST00000533492 PPP1R2P3Q6NXS1 205 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 CAVIN1Q6NZI2 390 aaKnown RBP15.74■□□□□ 0.11
CPSF1-211ENST00000533492 FBXL19Q6PCT2 694 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 IRF2BP2Q7Z5L9 587 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 HORMAD1Q86X24 394 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 MCOLN2Q8IZK6 566 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 SAP25Q8TEE9 199 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 ISG20Q96AZ6 181 aaKnown RBP15.74■□□□□ 0.11
CPSF1-211ENST00000533492 MYOCQ99972 504 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 TM6SF2Q9BZW4 377 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 ZDHHC6Q9H6R6 413 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 RTN4Q9NQC3 1192 aaKnown RBP15.74■□□□□ 0.11
CPSF1-211ENST00000533492 TOR4AQ9NXH8 423 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 MYO6Q9UM54 1294 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 ACTL7AQ9Y615 435 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 WASF2Q9Y6W5 498 aa15.74■□□□□ 0.11
CPSF1-211ENST00000533492 TMCO5BA8MYB1 307 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 LDOC1O95751 146 aaPredicted RBP15.73■□□□□ 0.11
CPSF1-211ENST00000533492 PRLRP16471 622 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 EPHB2P29323 1055 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 AKT2P31751 481 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 RXRGP48443 463 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 ZNF165P49910 485 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 NEK3P51956 506 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 SNRPD1P62314 119 aaKnown RBP15.73■□□□□ 0.11
CPSF1-211ENST00000533492 SCAPQ12770 1279 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 BNIP3Q12983 259 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 SHBQ15464 509 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 CCNI2Q6ZMN8 369 aaPredicted RBP15.73■□□□□ 0.11
CPSF1-211ENST00000533492 PYROXD2Q8N2H3 581 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 EID2Q8N6I1 236 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 VCPIP1Q96JH7 1222 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 FEM1CQ96JP0 617 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 EPAS1Q99814 870 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 CNPY3Q9BT09 278 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 CA5BQ9Y2D0 317 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 AKAP13Q12802 2813 aa15.73■□□□□ 0.11
CPSF1-211ENST00000533492 TCRBV5S1A1TA0A578 114 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 ZSCAN5CA6NGD5 496 aaPredicted RBP15.72■□□□□ 0.11
CPSF1-211ENST00000533492 RNF103O00237 685 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 BUB1O43683 1085 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 KDELR3O43731 214 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 CREB3O43889 395 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 CD160O95971 181 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 THEGLP0DJG4 465 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 ADRB3P13945 408 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 HNRNPA2B1P22626 353 aaKnown RBP15.72■□□□□ 0.11
CPSF1-211ENST00000533492 ITGB7P26010 798 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 EPHA8P29322 1005 aaPredicted RBP15.72■□□□□ 0.11
CPSF1-211ENST00000533492 AIF1P55008 147 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 ASIC2Q16515 512 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 ZNF284Q2VY69 593 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 LEKR1Q6ZMV7 388 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 TMPRSS7Q7RTY8 843 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 SPATS2Q86XZ4 545 aaKnown RBP15.72■□□□□ 0.11
CPSF1-211ENST00000533492 PLPP6Q8IY26 295 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 GALNT15Q8N3T1 639 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 RTL3Q8N8U3 475 aaKnown RBP15.72■□□□□ 0.11
CPSF1-211ENST00000533492 BAP1Q92560 729 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 CNDP2Q96KP4 475 aaKnown RBP15.72■□□□□ 0.11
CPSF1-211ENST00000533492 CATSPERBQ9H7T0 1116 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 PARVAQ9NVD7 372 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 FZD10Q9ULW2 581 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 IGF2RP11717 2491 aa15.72■□□□□ 0.11
CPSF1-211ENST00000533492 LRRC53A6NM62 1247 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 ENC1O14682 589 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 DKK1O94907 266 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 POP4O95707 220 aaKnown RBP15.71■□□□□ 0.11
CPSF1-211ENST00000533492 SERPINC1P01008 464 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 YBEYP58557 167 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-211ENST00000533492 RPS21P63220 83 aaKnown RBP15.71■□□□□ 0.11
CPSF1-211ENST00000533492 RAD51Q06609 339 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 MAPK8IP2Q13387 824 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-211ENST00000533492 PPP1R15BQ5SWA1 713 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 SFMBT2Q5VUG0 894 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 SEL1L3Q68CR1 1132 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 KIAA1161Q6NSJ0 714 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 TMEM145Q8NBT3 493 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 OR2AP1Q8NGE2 309 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 OR6K2Q8NGY2 324 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 LRIG1Q96JA1 1093 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 SLC17A9Q9BYT1 436 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 FZD3Q9NPG1 666 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 DONSONQ9NYP3 566 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 TAS2R14Q9NYV8 317 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 ZFR2Q9UPR6 939 aaKnown RBP15.71■□□□□ 0.11
CPSF1-211ENST00000533492 NEU3Q9UQ49 428 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 TRPM6Q9BX84 2022 aa15.71■□□□□ 0.11
CPSF1-211ENST00000533492 GOLGA4Q13439 2230 aaKnown RBP15.71■□□□□ 0.1
CPSF1-211ENST00000533492 KRIT1O00522 736 aa15.7■□□□□ 0.1
CPSF1-211ENST00000533492 NEMP1O14524 444 aa15.7■□□□□ 0.1
CPSF1-211ENST00000533492 PAK4O96013 591 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-211ENST00000533492 GSRP00390 522 aa15.7■□□□□ 0.1
CPSF1-211ENST00000533492 PSMA2P25787 234 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms