RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 RETSATQ6NUM9 610 aa12.58□□□□□ -0.4
RAD50-209ENST00000533482 TTC33Q6PID6 262 aaPredicted RBP12.58□□□□□ -0.4
RAD50-209ENST00000533482 ZNF567Q8N184 647 aa12.58□□□□□ -0.4
RAD50-209ENST00000533482 CMASQ8NFW8 434 aaPredicted RBP12.58□□□□□ -0.4
RAD50-209ENST00000533482 DQX1Q8TE96 717 aaKnown RBP12.58□□□□□ -0.4
RAD50-209ENST00000533482 MCRS1Q96EZ8 462 aa12.58□□□□□ -0.4
RAD50-209ENST00000533482 SCLYQ96I15 445 aa12.58□□□□□ -0.4
RAD50-209ENST00000533482 ADGRE3Q9BY15 652 aa12.58□□□□□ -0.4
RAD50-209ENST00000533482 SEMA4BQ9NPR2 832 aaPredicted RBP12.58□□□□□ -0.4
RAD50-209ENST00000533482 KIF17Q9P2E2 1029 aa12.58□□□□□ -0.4
RAD50-209ENST00000533482 PDP2Q9P2J9 529 aa12.58□□□□□ -0.4
RAD50-209ENST00000533482 PCDHGB4Q9UN71 923 aa12.58□□□□□ -0.4
RAD50-209ENST00000533482 TFEBP19484 476 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 CRABP2P29373 138 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 SMAD3P84022 425 aaKnown RBP12.57□□□□□ -0.4
RAD50-209ENST00000533482 GTF2H3Q13889 308 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 CCDC142Q17RM4 750 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 CIR1Q86X95 450 aaPredicted RBP12.57□□□□□ -0.4
RAD50-209ENST00000533482 ULK2Q8IYT8 1036 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 FBXO39Q8N4B4 442 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 OR6Y1Q8NGX8 325 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 ZNF398Q8TD17 642 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 GMIPQ9P107 970 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 INPP4BO15327 924 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 SEPT4O43236 478 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 RTN3O95197 1032 aaPredicted RBP12.57□□□□□ -0.4
RAD50-209ENST00000533482 TSHRP16473 764 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 ABL2P42684 1182 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 HDAC4P56524 1084 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 WNT3AP56704 352 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 GALNT3Q14435 633 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 OASLQ15646 514 aaKnown RBP12.57□□□□□ -0.4
RAD50-209ENST00000533482 ARHGAP15Q53QZ3 475 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 OTUD3Q5T2D3 398 aaPredicted RBP12.57□□□□□ -0.4
RAD50-209ENST00000533482 DRICH1Q6PGQ1 229 aaPredicted RBP12.57□□□□□ -0.4
RAD50-209ENST00000533482 C16orf87Q6PH81 154 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 SLC24A5Q71RS6 500 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 NAT8LQ8N9F0 302 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 FAR2Q96K12 515 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 POLR1EQ9GZS1 481 aaKnown RBP12.57□□□□□ -0.4
RAD50-209ENST00000533482 SYTL2Q9HCH5 934 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 UXTQ9UBK9 157 aaPredicted RBP12.57□□□□□ -0.4
RAD50-209ENST00000533482 PTCH2Q9Y6C5 1203 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 BCLAF3A2AJT9 711 aaKnown RBP12.57□□□□□ -0.4
RAD50-209ENST00000533482 BTN3A1O00481 513 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 DAB1O75553 588 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 CABYRO75952 493 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 LRRC74AQ0VAA2 488 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 BOP1Q14137 746 aaKnown RBP12.57□□□□□ -0.4
RAD50-209ENST00000533482 PCBP1Q15365 356 aaKnown RBP eCLIP12.57□□□□□ -0.4
RAD50-209ENST00000533482 TCEA2Q15560 299 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 HECTD3Q5T447 861 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 DPF3Q92784 378 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 HDAC10Q969S8 669 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 FAM162AQ96A26 154 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 HIC2Q96JB3 615 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 MRPL9Q9BYD2 267 aaKnown RBP12.57□□□□□ -0.4
RAD50-209ENST00000533482 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 HIPK3Q9H422 1215 aa12.57□□□□□ -0.4
RAD50-209ENST00000533482 LAMB4A4D0S4 1761 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 COX4I1P13073 169 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 PSMC3P17980 439 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 MPSTP25325 297 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 PSMA4P25789 261 aaKnown RBP12.56□□□□□ -0.4
RAD50-209ENST00000533482 GABRB2P47870 512 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 GPX6P59796 221 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 OLIG2Q13516 323 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 TEX44Q53QW1 395 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 FBXO48Q5FWF7 155 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 C11orf96Q7Z7L8 435 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 JADE3Q92613 823 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 ZYG11BQ9C0D3 744 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 LRMDAQ9H2I8 198 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 R3HDMLQ9H3Y0 253 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 WDR41Q9HAD4 459 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 TMEM216Q9P0N5 145 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 C5orf60A6NFR6 353 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 HDAC3O15379 428 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 LZTS3O60299 673 aaPredicted RBP12.56□□□□□ -0.4
RAD50-209ENST00000533482 MYO1DO94832 1006 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 TBX18O95935 607 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 CLPTM1O96005 669 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 ITGALP20701 1170 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 POU5F1Q01860 360 aaKnown RBP12.56□□□□□ -0.4
RAD50-209ENST00000533482 BANPQ8N9N5 519 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 GRIN3AQ8TCU5 1115 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 RCN3Q96D15 328 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 FOPNLQ96NB1 174 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 AGAP2Q99490 1192 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 CORO1BQ9BR76 489 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 HPS4Q9NQG7 708 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 CROTQ9UKG9 612 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 HBS1LQ9Y450 684 aaKnown RBP12.56□□□□□ -0.4
RAD50-209ENST00000533482 AOC2O75106 756 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 TOP3BO95985 862 aaKnown RBP12.56□□□□□ -0.4
RAD50-209ENST00000533482 HFE2Q6ZVN8 426 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 ARCQ7LC44 396 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 OTOP2Q7RTS6 562 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 FAM228AQ86W67 206 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms