RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 PABPC1LQ4VXU2 614 aaKnown RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 CHMP1BQ7LBR1 199 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 CLNKQ7Z7G1 428 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 GAL3ST3Q96A11 431 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 CHCHD6Q9BRQ6 235 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 SLCO1B3Q9NPD5 702 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 TMLHEQ9NVH6 421 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 SLC25A13Q9UJS0 675 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 PEX16Q9Y5Y5 336 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 LAMA4Q16363 1823 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 SETD1AO15047 1707 aaKnown RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 OXSR1O95747 527 aaPredicted RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 ECDO95905 644 aaPredicted RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 PEX2P28328 305 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 CD83Q01151 205 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 ZNF829Q3KNS6 432 aaPredicted RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 C1orf189Q5VU69 101 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 DEF8Q6ZN54 512 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 ARMC8Q8IUR7 673 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 CCDC24Q8N4L8 307 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 TRNT1Q96Q11 434 aaKnown RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 NOL11Q9H8H0 719 aaKnown RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 EXD2Q9NVH0 621 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 UBQLN1Q9UMX0 589 aaKnown RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 PCDHB9Q9Y5E1 797 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 RGSL1A5PLK6 1076 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 SDR42E2A6NKP2 422 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 PDE2AO00408 941 aaPredicted RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 PRKAB2O43741 272 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 CD4P01730 458 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 HIST1H2AGP0C0S8 130 aaPredicted RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 HIST1H2ADP20671 130 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 MCAMP43121 646 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 PPP3CCP48454 512 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 OGFOD2Q6N063 350 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 EEPD1Q7L9B9 569 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 CYP2U1Q7Z449 544 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 VANGL1Q8TAA9 524 aaPredicted RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 EEF1AKMT1Q8WVE0 214 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 HIST1H2AHQ96KK5 128 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 HIST1H2AJQ99878 128 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 H2AFJQ9BTM1 129 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 SHOC2Q9UQ13 582 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 DHRS12A0PJE2 317 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 FAM25EA8MYX2 175 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 CENPBD1B2RD01 187 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 PLD2O14939 933 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 MT-CO1P00395 513 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 CYP2C9P11712 490 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 MSR1P21757 451 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 PAICSP22234 425 aaKnown RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 TBX2Q13207 712 aaPredicted RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 TFDP3Q5H9I0 405 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 HAGHLQ6PII5 290 aaPredicted RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 KYAT3Q6YP21 454 aaKnown RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 PJA1Q8NG27 643 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 CEP295NLQ96MC4 621 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 ARMC7Q9H6L4 198 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 REEP1Q9H902 201 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 ARL8BQ9NVJ2 186 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 SH3BP4Q9P0V3 963 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 MYCLP1P12525 358 aaPredicted RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 PTGER2P43116 358 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 PIK3CGP48736 1102 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 SNRPFP62306 86 aaKnown RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 CDC16Q13042 620 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 PDIA6Q15084 440 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 MB21D2Q8IYB1 491 aaPredicted RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 SPPL2AQ8TCT8 520 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 HAVCR1Q96D42 359 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 TPD52L3Q96J77 140 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 LATS2Q9NRM7 1088 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 QPCTLQ9NXS2 382 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 MED11Q9P086 117 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 SCGNO76038 276 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 H6PDO95479 791 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 LBPP18428 481 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 NR4A1P22736 598 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 MYBPC3Q14896 1274 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 ALYREFQ86V81 257 aaKnown RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 DIRAS2Q96HU8 199 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 NAT9Q9BTE0 207 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 C1QTNF1Q9BXJ1 281 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 SENP2Q9HC62 589 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 IKZF3Q9UKT9 509 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 ROBO1Q9Y6N7 1651 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 ZMYM2Q9UBW7 1377 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 AHDC1Q5TGY3 1603 aaPredicted RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 C12orf71A8MTZ7 269 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 TOR1BO14657 336 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 GDF11O95390 407 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 METTL18O95568 372 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 FADS2O95864 444 aaKnown RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 UGT2B4P06133 528 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 NUDT17P0C025 328 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 CDK9P50750 372 aaKnown RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 FOXO4P98177 505 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 EN1Q05925 392 aaPredicted RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 MED22Q15528 200 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 FNDC8Q8TC99 324 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms