RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 C21orf59P57076 290 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 SFSWAPQ12872 951 aaKnown RBP18.15■□□□□ 0.5
SMG1-203ENST00000532700 BNIP3Q12983 259 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 MAMLD1Q13495 774 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 FGL2Q14314 439 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 ZNF284Q2VY69 593 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 ARL13BQ3SXY8 428 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 ATXN7L2Q5T6C5 722 aaPredicted RBP18.15■□□□□ 0.5
SMG1-203ENST00000532700 LRSAM1Q6UWE0 723 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 PARS2Q7L3T8 475 aaKnown RBP18.15■□□□□ 0.5
SMG1-203ENST00000532700 SLFN11Q7Z7L1 901 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 ADAMTS14Q8WXS8 1223 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 ELF4Q99607 663 aaPredicted RBP18.15■□□□□ 0.5
SMG1-203ENST00000532700 ITM2BQ9Y287 266 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 NEUROG3Q9Y4Z2 214 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 CACNA1BQ00975 2339 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 TLR4O00206 839 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 SLC31A1O15431 190 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 PCDHGA12O60330 932 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 ABL2P42684 1182 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 MAPKAPK2P49137 400 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 NR1I3Q14994 352 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 ASIC2Q16515 512 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 CARD16Q5EG05 197 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 LRRC73Q5JTD7 316 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 ACBD5Q5T8D3 534 aaPredicted RBP18.14■□□□□ 0.49
SMG1-203ENST00000532700 PLEKHA7Q6IQ23 1121 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 KANSL1Q7Z3B3 1105 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 TMEM145Q8NBT3 493 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 SAP25Q8TEE9 199 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 HMCESQ96FZ2 354 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 CNPY3Q9BT09 278 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 KDM4CQ9H3R0 1056 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 ZDHHC6Q9H6R6 413 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 MYO6Q9UM54 1294 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 LRRK1Q38SD2 2015 aa18.14■□□□□ 0.49
SMG1-203ENST00000532700 CREB3O43889 395 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 PRNPP04156 253 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 CAPNS1P04632 268 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 TNFAIP3P21580 790 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 L1CAMP32004 1257 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 PBX1P40424 430 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 CLDN2P57739 230 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 TMEM259Q4ZIN3 620 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 RETSATQ6NUM9 610 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 ERN2Q76MJ5 926 aaKnown RBP18.13■□□□□ 0.49
SMG1-203ENST00000532700 TMC6Q7Z403 805 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 PCDH20Q8N6Y1 951 aaKnown RBP18.13■□□□□ 0.49
SMG1-203ENST00000532700 RTL3Q8N8U3 475 aaKnown RBP18.13■□□□□ 0.49
SMG1-203ENST00000532700 CEP44Q9C0F1 390 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 TSPY26PQ9H489 355 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 PREBQ9HCU5 417 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 AIPL1Q9NZN9 384 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 RALYQ9UKM9 306 aaKnown RBP18.13■□□□□ 0.49
SMG1-203ENST00000532700 MSRB2Q9Y3D2 182 aa18.13■□□□□ 0.49
SMG1-203ENST00000532700 TRPM6Q9BX84 2022 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 A0A1W2PQC6 194 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 FAM221BA6H8Z2 402 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 RAD51BO15315 384 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 RAMP2O60895 175 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 SDC3O75056 442 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 SERPINC1P01008 464 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 ADRB3P13945 408 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 TCF4P15884 667 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 EPHA8P29322 1005 aaPredicted RBP18.12■□□□□ 0.49
SMG1-203ENST00000532700 EPHB2P29323 1055 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 PRKCIP41743 596 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 HNRNPDQ14103 355 aaKnown RBP18.12■□□□□ 0.49
SMG1-203ENST00000532700 POLD3Q15054 466 aaPredicted RBP18.12■□□□□ 0.49
SMG1-203ENST00000532700 HGSNATQ68CP4 663 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 GCNT7Q6ZNI0 430 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 PRPF39Q86UA1 669 aaKnown RBP18.12■□□□□ 0.49
SMG1-203ENST00000532700 HEPHQ9BQS7 1158 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 HDAC8Q9BY41 377 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 MAGEH1Q9H213 219 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 TMEM51Q9NW97 253 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 HECAQ9UBI9 543 aaPredicted RBP18.12■□□□□ 0.49
SMG1-203ENST00000532700 ZMIZ1Q9ULJ6 1067 aa18.12■□□□□ 0.49
SMG1-203ENST00000532700 ANKRD36A6QL64 1941 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 TMEM191CA6NGB0 347 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 RASA4BC9J798 803 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 INSIG1O15503 277 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 RASA4O43374 803 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 KDELR3O43731 214 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 TMCC1O94876 653 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 ITIH2P19823 946 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 ITGB7P26010 798 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 GRK6P43250 576 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 DNAJC3Q13217 504 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 CCDC157Q569K6 752 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 EFHC2Q5JST6 749 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 TPRG1LQ5T0D9 272 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 SFMBT2Q5VUG0 894 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 DCUN1D2Q6PH85 259 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 HORMAD1Q86X24 394 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 TP53INP2Q8IXH6 220 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 SLC22A18ASQ8N1D0 253 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 MFSD2AQ8NA29 543 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 KDF1Q8NAX2 398 aaPredicted RBP18.11■□□□□ 0.49
SMG1-203ENST00000532700 OR13H1Q8NG92 308 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms