RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	ZNF350	Q9GZX5	532 aa		5.36	□□□□□ -1.55
ECHDC1-222	ENST00000531967	RAB33B	Q9H082	229 aa		5.36	□□□□□ -1.55
ECHDC1-222	ENST00000531967	FBRSL1	Q9HCM7	1045 aa	Known RBP	5.36	□□□□□ -1.55
ECHDC1-222	ENST00000531967	DNAJC11	Q9NVH1	559 aa		5.36	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TMLHE	Q9NVH6	421 aa		5.36	□□□□□ -1.55
ECHDC1-222	ENST00000531967	RAB20	Q9NX57	234 aa		5.36	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ALKBH4	Q9NXW9	302 aa		5.36	□□□□□ -1.55
ECHDC1-222	ENST00000531967	VAV3	Q9UKW4	847 aa		5.36	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CCPG1	Q9ULG6	757 aa		5.36	□□□□□ -1.55
ECHDC1-222	ENST00000531967	C15orf41	Q9Y2V0	281 aa		5.36	□□□□□ -1.55
ECHDC1-222	ENST00000531967	COMMD3-BMI1	R4GMX3	469 aa		5.36	□□□□□ -1.55
ECHDC1-222	ENST00000531967		X6R8D5	127 aa		5.36	□□□□□ -1.55
ECHDC1-222	ENST00000531967	LOC102723971	A0A1B0GUV8	181 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967		A0A1W2PQF6	199 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PRAMEF22	A3QJZ6	481 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	MFSD2B	A6NFX1	497 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ANXA2P2	A6NMY6	339 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	GNAT3	A8MTJ3	354 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	KRIT1	O00522	736 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ZNF205	O95201	554 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ALB	P02768	609 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	RALA	P11233	206 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	BMP2	P12643	396 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TCEA1	P23193	301 aa	Known RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ECHS1	P30084	290 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CTNNB1	P35222	781 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	RFC2	P35250	354 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	KCNJ1	P48048	391 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	SLC6A11	P48066	632 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	RAB28	P51157	221 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ST8SIA6	P61647	398 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	GRAP	Q13588	217 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	EXOSC6	Q5RKV6	272 aa	Known RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	UBAP2	Q5T6F2	1119 aa	Known RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PRAMEF18	Q5VWM3	479 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	KANK2	Q63ZY3	851 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	AAGAB	Q6PD74	315 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	C15orf39	Q6ZRI6	1047 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	MED25	Q71SY5	747 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	DHX40	Q8IX18	779 aa	Known RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	FBXO18	Q8NFZ0	1043 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	OR2T34	Q8NGX1	318 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	GRAPL	Q8TC17	118 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	GLMP	Q8WWB7	406 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	SMARCE1	Q969G3	411 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TMEM186	Q96B77	213 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TMIGD2	Q96BF3	282 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	C5orf30	Q96GV9	206 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PRR11	Q96HE9	360 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TPPP3	Q9BW30	176 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	GLIS2	Q9BZE0	524 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	GPR61	Q9BZJ8	451 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PITHD1	Q9GZP4	211 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	BARX1	Q9HBU1	254 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	SENP2	Q9HC62	589 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	FAM212B	Q9NTI7	297 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	LIN7C	Q9NUP9	197 aa	Known RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	SIDT1	Q9NXL6	827 aa	Known RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	DNAJB11	Q9UBS4	358 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ACSL6	Q9UKU0	697 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CDYL	Q9Y232	598 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	COA3	Q9Y2R0	106 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	GMEB1	Q9Y692	573 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	KIF7	Q2M1P5	1343 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967		A0A0A0MRY4	1105 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	KDM4E	B2RXH2	506 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CCDC188	H7C350	402 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ATP2A1	O14983	1001 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	DNAJB5	O75953	348 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	GBA	P04062	536 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CD1A	P06126	327 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	LIPF	P07098	398 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	C1S	P09871	688 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	COX7A2	P14406	83 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TNFRSF1A	P19438	455 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TRIM21	P19474	475 aa	Known RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CYP2A7	P20853	494 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	CORO1A	P31146	461 aa	Known RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	HUNK	P57058	714 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TIRAP	P58753	221 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	IRX1	P78414	480 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	GCNT1	Q02742	428 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TRAF1	Q13077	416 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	BYSL	Q13895	437 aa	Known RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	RCN1	Q15293	331 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	NPY5R	Q15761	445 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	FASTKD1	Q53R41	847 aa	Known RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	MFSD14B	Q5SR56	506 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	FAM182B	Q5T319	152 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PLA2G4F	Q68DD2	849 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	TTC19	Q6DKK2	380 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	HMBOX1	Q6NT76	420 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PRR23C	Q6ZRP0	262 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	ZNF655	Q8N720	491 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	DAGLB	Q8NCG7	672 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	AGBL3	Q8NEM8	1001 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	DBF4B	Q8NFT6	615 aa		5.35	□□□□□ -1.55
ECHDC1-222	ENST00000531967	PTER	Q96BW5	349 aa		5.35	□□□□□ -1.55

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