RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 TPI1P60174 286 aa19.17■□□□□ 0.66
PCNX3-203ENST00000530174 SIM1P81133 766 aaPredicted RBP19.17■□□□□ 0.66
PCNX3-203ENST00000530174 CA9Q16790 459 aa19.17■□□□□ 0.66
PCNX3-203ENST00000530174 PRPF39Q86UA1 669 aaKnown RBP19.17■□□□□ 0.66
PCNX3-203ENST00000530174 VPS36Q86VN1 386 aa19.17■□□□□ 0.66
PCNX3-203ENST00000530174 TRIM69Q86WT6 500 aa19.17■□□□□ 0.66
PCNX3-203ENST00000530174 ZNF354CQ86Y25 554 aa19.17■□□□□ 0.66
PCNX3-203ENST00000530174 HMCESQ96FZ2 354 aa19.17■□□□□ 0.66
PCNX3-203ENST00000530174 PPP1R16AQ96I34 528 aa19.17■□□□□ 0.66
PCNX3-203ENST00000530174 SNRNP25Q9BV90 132 aaKnown RBP19.17■□□□□ 0.66
PCNX3-203ENST00000530174 KLC2Q9H0B6 622 aa19.17■□□□□ 0.66
PCNX3-203ENST00000530174 DHX35Q9H5Z1 703 aaKnown RBP19.17■□□□□ 0.66
PCNX3-203ENST00000530174 PREBQ9HCU5 417 aa19.17■□□□□ 0.66
PCNX3-203ENST00000530174 MRPL47Q9HD33 250 aaKnown RBP19.17■□□□□ 0.66
PCNX3-203ENST00000530174 HECAQ9UBI9 543 aaPredicted RBP19.17■□□□□ 0.66
PCNX3-203ENST00000530174 LUC7L2Q9Y383 392 aaKnown RBP19.17■□□□□ 0.66
PCNX3-203ENST00000530174 TP53BP1Q12888 1972 aaPredicted RBP19.17■□□□□ 0.66
PCNX3-203ENST00000530174 CHD8Q9HCK8 2581 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 A0A1W2PR77 199 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 RASA4BC9J798 803 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 H0Y8X5 98 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 FGF10O15520 208 aaPredicted RBP19.16■□□□□ 0.66
PCNX3-203ENST00000530174 RASA4O43374 803 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 BUB1O43683 1085 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 CD38P28907 300 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 MIPP30301 263 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 HTR7P34969 479 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 YBEYP58557 167 aaPredicted RBP19.16■□□□□ 0.66
PCNX3-203ENST00000530174 SHC2P98077 582 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 CCDC15Q0P6D6 951 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 FOXC1Q12948 553 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 HNRNPDQ14103 355 aaKnown RBP19.16■□□□□ 0.66
PCNX3-203ENST00000530174 ERMARDQ5T6L9 678 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 NAPEPLDQ6IQ20 393 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 CYP4V2Q6ZWL3 525 aaPredicted RBP19.16■□□□□ 0.66
PCNX3-203ENST00000530174 ERN2Q76MJ5 926 aaKnown RBP19.16■□□□□ 0.66
PCNX3-203ENST00000530174 PLPP6Q8IY26 295 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 UMODL1-AS1Q8N2C9 162 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 CNTNAP3BQ96NU0 1288 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 HDAC8Q9BY41 377 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 CNTNAP3Q9BZ76 1288 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 ZDHHC6Q9H6R6 413 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 PCDHGB2Q9Y5G2 931 aa19.16■□□□□ 0.66
PCNX3-203ENST00000530174 DOCK9Q9BZ29 2069 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 ZSCAN5CA6NGD5 496 aaPredicted RBP19.15■□□□□ 0.66
PCNX3-203ENST00000530174 EIF3CLB5ME19 914 aaKnown RBP19.15■□□□□ 0.66
PCNX3-203ENST00000530174 EEF2KO00418 725 aaKnown RBP19.15■□□□□ 0.66
PCNX3-203ENST00000530174 PRPSAP2O60256 369 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 RNGTTO60942 597 aaKnown RBP19.15■□□□□ 0.66
PCNX3-203ENST00000530174 LRCH4O75427 683 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 TMCC1O94876 653 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 TPM3P06753 285 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 ITGB7P26010 798 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 CASP14P31944 242 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 NUDT1P36639 197 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 ZNF423Q2M1K9 1284 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 PARP15Q460N3 678 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 RYBPQ8N488 228 aaPredicted RBP19.15■□□□□ 0.66
PCNX3-203ENST00000530174 OR2AP1Q8NGE2 309 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 OR6K2Q8NGY2 324 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 SKA1Q96BD8 255 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 KCTD15Q96SI1 283 aaPredicted RBP19.15■□□□□ 0.66
PCNX3-203ENST00000530174 EIF3CQ99613 913 aaKnown RBP19.15■□□□□ 0.66
PCNX3-203ENST00000530174 TSPY26PQ9H489 355 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 DMTF1Q9Y222 760 aa19.15■□□□□ 0.66
PCNX3-203ENST00000530174 CEP295Q9C0D2 2601 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 A0A087X0T9 212 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 A0A1W2PQU0 124 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 CBFA2T3O75081 653 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 GSRP00390 522 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 FAM228BP0C875 321 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 GKP32189 559 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 CCT8P50990 548 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 NEK3P51956 506 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 SNRPD1P62314 119 aaKnown RBP19.14■□□□□ 0.65
PCNX3-203ENST00000530174 SERINC3Q13530 473 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 TRIP6Q15654 476 aaKnown RBP19.14■□□□□ 0.65
PCNX3-203ENST00000530174 SETMARQ53H47 684 aaPredicted RBP19.14■□□□□ 0.65
PCNX3-203ENST00000530174 SLC45A4Q5BKX6 768 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 ATXN7L2Q5T6C5 722 aaPredicted RBP19.14■□□□□ 0.65
PCNX3-203ENST00000530174 NEK5Q6P3R8 708 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 DBX2Q6ZNG2 339 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 SETD7Q8WTS6 366 aaKnown RBP19.14■□□□□ 0.65
PCNX3-203ENST00000530174 THAP2Q9H0W7 228 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 PCOLCE2Q9UKZ9 415 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 PCDHB9Q9Y5E1 797 aa19.14■□□□□ 0.65
PCNX3-203ENST00000530174 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.14■□□□□ 0.65
PCNX3-203ENST00000530174 KRIT1O00522 736 aa19.13■□□□□ 0.65
PCNX3-203ENST00000530174 FLRT2O43155 660 aa19.13■□□□□ 0.65
PCNX3-203ENST00000530174 TOP3BO95985 862 aaKnown RBP19.13■□□□□ 0.65
PCNX3-203ENST00000530174 ADRB3P13945 408 aa19.13■□□□□ 0.65
PCNX3-203ENST00000530174 IL9RQ01113 521 aa19.13■□□□□ 0.65
PCNX3-203ENST00000530174 NFKBIBQ15653 356 aa19.13■□□□□ 0.65
PCNX3-203ENST00000530174 PPP6R3Q5H9R7 873 aaPredicted RBP19.13■□□□□ 0.65
PCNX3-203ENST00000530174 PRAMEF14Q5SWL7 426 aa19.13■□□□□ 0.65
PCNX3-203ENST00000530174 RFX8Q6ZV50 586 aa19.13■□□□□ 0.65
PCNX3-203ENST00000530174 PARS2Q7L3T8 475 aaKnown RBP19.13■□□□□ 0.65
PCNX3-203ENST00000530174 HORMAD1Q86X24 394 aa19.13■□□□□ 0.65
PCNX3-203ENST00000530174 PSTKQ8IV42 348 aaKnown RBP19.13■□□□□ 0.65
PCNX3-203ENST00000530174 NETO2Q8NC67 525 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms