RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 NT5C1BQ96P26 610 aa10.66□□□□□ -0.7
COPB1-207ENST00000529866 MED15Q96RN5 788 aa10.66□□□□□ -0.7
COPB1-207ENST00000529866 PRMT1Q99873 361 aaKnown RBP10.66□□□□□ -0.7
COPB1-207ENST00000529866 SCAND2PQ9GZW5 306 aaPredicted RBP10.66□□□□□ -0.7
COPB1-207ENST00000529866 SLC25A18Q9H1K4 315 aa10.66□□□□□ -0.7
COPB1-207ENST00000529866 CAAP1Q9H8G2 361 aa10.66□□□□□ -0.7
COPB1-207ENST00000529866 IL36AQ9UHA7 158 aa10.66□□□□□ -0.7
COPB1-207ENST00000529866 BSNQ9UPA5 3926 aa10.66□□□□□ -0.7
COPB1-207ENST00000529866 SPTBN1Q01082 2364 aaKnown RBP10.65□□□□□ -0.7
COPB1-207ENST00000529866 LMO7DNF2Z398 122 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 NTN3O00634 580 aaPredicted RBP10.65□□□□□ -0.7
COPB1-207ENST00000529866 PAK4O96013 591 aaPredicted RBP10.65□□□□□ -0.7
COPB1-207ENST00000529866 IGLV3-25P01717 112 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 SRCP12931 536 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 UGT1A5P35504 534 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 CDK17Q00537 523 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 PTK2BQ14289 1009 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 PRRT3Q5FWE3 981 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 DENND6BQ8NEG7 585 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 SCG3Q8WXD2 468 aaKnown RBP10.65□□□□□ -0.7
COPB1-207ENST00000529866 TMEM74Q96NL1 305 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 GFM1Q96RP9 751 aaKnown RBP10.65□□□□□ -0.7
COPB1-207ENST00000529866 SLC13A1Q9BZW2 595 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 GEMIN8Q9NWZ8 242 aaKnown RBP10.65□□□□□ -0.7
COPB1-207ENST00000529866 DDIT4Q9NX09 232 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 KLF15Q9UIH9 416 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 PADI4Q9UM07 663 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 DOLKQ9UPQ8 538 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 PCDHB11Q9Y5F2 797 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 PCDHGA4Q9Y5G9 962 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 OR51B4Q9Y5P0 310 aa10.65□□□□□ -0.7
COPB1-207ENST00000529866 SYNJ2BP-COX16A0A087WUM0 186 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 D6RAR5 112 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 M0QYT0 321 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 NVLO15381 856 aaKnown RBP10.64□□□□□ -0.71
COPB1-207ENST00000529866 NOBOXO60393 691 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 LEFTY1O75610 366 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 RHOCP08134 193 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 ADRB3P13945 408 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 RRM1P23921 792 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 ITGB7P26010 798 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 NOS2P35228 1153 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 RPL34P49207 117 aaKnown RBP10.64□□□□□ -0.71
COPB1-207ENST00000529866 THOP1P52888 689 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 ADKP55263 362 aaKnown RBP10.64□□□□□ -0.71
COPB1-207ENST00000529866 CDH4P55283 916 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 YWHAZP63104 245 aaKnown RBP10.64□□□□□ -0.71
COPB1-207ENST00000529866 CETN1Q12798 172 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 AUHQ13825 339 aaKnown RBP10.64□□□□□ -0.71
COPB1-207ENST00000529866 FGL2Q14314 439 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 TGIF1Q15583 401 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 TBR1Q16650 682 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 ARSIQ5FYB1 569 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 ANKRD40Q6AI12 368 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 C22orf39Q6P5X5 142 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 PHACTR4Q8IZ21 702 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 PPM1KQ8N3J5 372 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 ARL10Q8N8L6 244 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 DCAF4L2Q8NA75 395 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 STK32AQ8WU08 396 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 TMEM159Q96B96 161 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 LENG8Q96PV6 779 aaPredicted RBP10.64□□□□□ -0.71
COPB1-207ENST00000529866 TSG101Q99816 390 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 ZSWIM1Q9BR11 485 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 ADNPQ9H2P0 1102 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 THAP9Q9H5L6 903 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 COX16Q9P0S2 106 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 PISDQ9UG56 409 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 VPS51Q9UID3 782 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 VANGL2Q9ULK5 521 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 TBC1D30Q9Y2I9 924 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 LOXL2Q9Y4K0 774 aa10.64□□□□□ -0.71
COPB1-207ENST00000529866 NEMP1O14524 444 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 RAD51BO15315 384 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 AP1G1O43747 822 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 SNAP91O60641 907 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 MT-CO1P00395 513 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 CD44P16070 742 aaKnown RBP10.63□□□□□ -0.71
COPB1-207ENST00000529866 CD82P27701 267 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 CCKBRP32239 447 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 GPD2P43304 727 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 PFN3P60673 137 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 EIF2B5Q13144 721 aaKnown RBP10.63□□□□□ -0.71
COPB1-207ENST00000529866 SRSF6Q13247 344 aaKnown RBP10.63□□□□□ -0.71
COPB1-207ENST00000529866 SERINC3Q13530 473 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 MORC3Q14149 939 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 MEA1Q16626 185 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 ZNF658Q5TYW1 1059 aaPredicted RBP10.63□□□□□ -0.71
COPB1-207ENST00000529866 DPY19L3Q6ZPD9 716 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 B3GNT8Q7Z7M8 397 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 RBFAQ8N0V3 343 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 CHST14Q8NCH0 376 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 OR6C4Q8NGE1 309 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 OR52K2Q8NGK3 314 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 SPATA20Q8TB22 786 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 CCDC34Q96HJ3 373 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 PPP1R13BQ96KQ4 1090 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 LRRC61Q9BV99 259 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 GULP1Q9UBP9 304 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 ARMCX3Q9UH62 379 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms