RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 POLR1BQ9H9Y6 1135 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 DNAJC28Q9NX36 388 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 AP3M1Q9Y2T2 418 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 PLLPQ9Y342 182 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 PCDHAC2Q9Y5I4 1007 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 CSADQ9Y600 493 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 CLRN2A0PK11 232 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 SSTR3P32745 418 aaPredicted RBP8.1□□□□□ -1.11
C11orf88-203ENST00000529167 FCGRTP55899 365 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 TMPRSS15P98073 1019 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 CETN1Q12798 172 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 PTP4A2Q12974 167 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 DSC3Q14574 896 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 TAF5Q15542 800 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 SNAP47Q5SQN1 464 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 KCTD8Q6ZWB6 473 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 OR6F1Q8NGZ6 308 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 JPH3Q8WXH2 748 aaPredicted RBP8.1□□□□□ -1.11
C11orf88-203ENST00000529167 INTS12Q96CB8 462 aaKnown RBP8.1□□□□□ -1.11
C11orf88-203ENST00000529167 TOE1Q96GM8 510 aaKnown RBP8.1□□□□□ -1.11
C11orf88-203ENST00000529167 ASB2Q96Q27 587 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 TTPALQ9BTX7 342 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 ADAMTS10Q9H324 1103 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 SERPINB13Q9UIV8 391 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 SHOC2Q9UQ13 582 aa8.1□□□□□ -1.11
C11orf88-203ENST00000529167 WBP11Q9Y2W2 641 aaKnown RBP8.1□□□□□ -1.11
C11orf88-203ENST00000529167 CAPN1P07384 714 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 COX4I1P13073 169 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 SLC9A3P48764 834 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 PRKAA2P54646 552 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 RACK1P63244 317 aaKnown RBP8.09□□□□□ -1.11
C11orf88-203ENST00000529167 MS4A2Q01362 244 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 BST2Q10589 180 aaKnown RBP8.09□□□□□ -1.11
C11orf88-203ENST00000529167 LEXMQ3ZCV2 418 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 C5orf22Q49AR2 442 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 RNASEH2BQ5TBB1 312 aaKnown RBP8.09□□□□□ -1.11
C11orf88-203ENST00000529167 DRICH1Q6PGQ1 229 aaPredicted RBP8.09□□□□□ -1.11
C11orf88-203ENST00000529167 PACRGLQ8N7B6 248 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 CMASQ8NFW8 434 aaPredicted RBP8.09□□□□□ -1.11
C11orf88-203ENST00000529167 TTLQ8NG68 377 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 PIWIL2Q8TC59 973 aaKnown RBP8.09□□□□□ -1.11
C11orf88-203ENST00000529167 STON2Q8WXE9 905 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 KLHL32Q96NJ5 620 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 TM9SF2Q99805 663 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 ADAM33Q9BZ11 813 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 DPEP3Q9H4B8 488 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 ZNFX1Q9P2E3 1918 aaKnown RBP8.09□□□□□ -1.11
C11orf88-203ENST00000529167 DEAF1O75398 565 aaPredicted RBP8.09□□□□□ -1.11
C11orf88-203ENST00000529167 KCNK2O95069 426 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 IL18RAPO95256 599 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 NADKO95544 446 aaPredicted RBP8.09□□□□□ -1.11
C11orf88-203ENST00000529167 INHAP05111 366 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 KRT8P05787 483 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 BMP1P13497 986 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 IMPDH1P20839 514 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 RPL10P27635 214 aaKnown RBP8.09□□□□□ -1.11
C11orf88-203ENST00000529167 CSTF2P33240 577 aaKnown RBP eCLIP8.09□□□□□ -1.11
C11orf88-203ENST00000529167 CACNB3P54284 484 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 TBX4P57082 545 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 GHRHRQ02643 423 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 VAC14Q08AM6 782 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 IKQ13123 557 aaPredicted RBP8.09□□□□□ -1.11
C11orf88-203ENST00000529167 NAB1Q13506 487 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 MAPRE2Q15555 327 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 YIF1BQ5BJH7 314 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 C16orf89Q6UX73 402 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 BEND5Q7L4P6 421 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 RIOX2Q8IUF8 465 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 APBB2Q92870 758 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 KLF6Q99612 283 aaPredicted RBP8.09□□□□□ -1.11
C11orf88-203ENST00000529167 ARMT1Q9H993 441 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 ZNF70Q9UC06 446 aaPredicted RBP8.09□□□□□ -1.11
C11orf88-203ENST00000529167 CPA4Q9UI42 421 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 KCNH4Q9UQ05 1017 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 PCM1Q15154 2024 aa8.09□□□□□ -1.11
C11orf88-203ENST00000529167 PNMA6FA0A0J9YX94 578 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 FAM25AB3EWG3 89 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 FAM25CB3EWG5 89 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 FAM25GB3EWG6 89 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 E7ESA3 106 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 DLGAP1O14490 977 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 PDPK1O15530 556 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 GAS7O60861 476 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 AKAP3O75969 853 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 OR5F1O95221 314 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 IL1R1P14778 569 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 XRCC1P18887 633 aaPredicted RBP8.09□□□□□ -1.12
C11orf88-203ENST00000529167 PIK3R1P27986 724 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 RBL1P28749 1068 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 CTSWP56202 376 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 GPLD1P80108 840 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 TNK2Q07912 1038 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 TRIM32Q13049 653 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 PXDC1Q5TGL8 231 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 LYPD8Q6UX82 237 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.09□□□□□ -1.12
C11orf88-203ENST00000529167 BNC2Q6ZN30 1099 aaPredicted RBP8.09□□□□□ -1.12
C11orf88-203ENST00000529167 CDHR3Q6ZTQ4 885 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 KCNK18Q7Z418 384 aa8.09□□□□□ -1.12
C11orf88-203ENST00000529167 CPNE8Q86YQ8 564 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms