RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 SLC2A11Q9BYW1 496 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 NAT10Q9H0A0 1025 aaKnown RBP8.73□□□□□ -1.01
SSBP3-212ENST00000528930 NUCKS1Q9H1E3 243 aaKnown RBP8.73□□□□□ -1.01
SSBP3-212ENST00000528930 THAP10Q9P2Z0 257 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-212ENST00000528930 XPO7Q9UIA9 1087 aaKnown RBP8.73□□□□□ -1.01
SSBP3-212ENST00000528930 NOCTQ9UK39 431 aaKnown RBP8.73□□□□□ -1.01
SSBP3-212ENST00000528930 CYP8B1Q9UNU6 501 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 CLCA2Q9UQC9 943 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 DAAM1Q9Y4D1 1078 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 KIF26BQ2KJY2 2108 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 SYCE3A1L190 88 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 SMTNL1A8MU46 457 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 KCNU1A8MYU2 1149 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 DAB1O75553 588 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 LSM8O95777 96 aaKnown RBP8.72□□□□□ -1.01
SSBP3-212ENST00000528930 CYP1A1P04798 512 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-212ENST00000528930 HOXB2P14652 356 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 NOS2P35228 1153 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 STAT1P42224 750 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 SLC11A2P49281 568 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 ZNF165P49910 485 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 CCT8P50990 548 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 INHBCP55103 352 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 SNRPNP63162 240 aaKnown RBP8.72□□□□□ -1.01
SSBP3-212ENST00000528930 NOMO3P69849 1222 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 FMO1Q01740 532 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 CDR2Q01850 454 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 DNAJC3Q13217 504 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 C2CD6Q53TS8 623 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 MS4A13Q5J8X5 152 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 MPP7Q5T2T1 576 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 OTUD1Q5VV17 481 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-212ENST00000528930 ANKS1BQ7Z6G8 1248 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 ZNF677Q86XU0 584 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 XYLT1Q86Y38 959 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 ZDHHC17Q8IUH5 632 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 CHPFQ8IZ52 775 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 LSMEM2Q8N112 164 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.72□□□□□ -1.01
SSBP3-212ENST00000528930 NEK11Q8NG66 645 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 IPO4Q8TEX9 1081 aaKnown RBP8.72□□□□□ -1.01
SSBP3-212ENST00000528930 NT5C3BQ969T7 300 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 C18orf8Q96DM3 657 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 LMLNQ96KR4 655 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 PRICKLE1Q96MT3 831 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-212ENST00000528930 PCDHB18PQ96TA0 734 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 NPY6RQ99463 290 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 CD93Q9NPY3 652 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.72□□□□□ -1.01
SSBP3-212ENST00000528930 ELOVL2Q9NXB9 296 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 CEP83Q9Y592 693 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 HIVEP3Q5T1R4 2406 aa8.72□□□□□ -1.01
SSBP3-212ENST00000528930 ANKHD1Q8IWZ3 2542 aaKnown RBP8.72□□□□□ -1.01
SSBP3-212ENST00000528930 NUMA1Q14980 2115 aa8.71□□□□□ -1.01
SSBP3-212ENST00000528930 A0A1B0GVT2 93 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 FAM170AA1A519 330 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 WIPF3A6NGB9 483 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 CBX4O00257 560 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 TBL1XO60907 577 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 MOCS2O96007 188 aaPredicted RBP8.71□□□□□ -1.02
SSBP3-212ENST00000528930 UNGP13051 313 aaPredicted RBP8.71□□□□□ -1.02
SSBP3-212ENST00000528930 TFE3P19532 575 aaPredicted RBP8.71□□□□□ -1.02
SSBP3-212ENST00000528930 CD70P32970 193 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 SCNN1AP37088 669 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 CASRP41180 1078 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 OXCT1P55809 520 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 SNX16P57768 344 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 RPS24P62847 133 aaKnown RBP8.71□□□□□ -1.02
SSBP3-212ENST00000528930 CDK17Q00537 523 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 ILKQ13418 452 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 EIF4HQ15056 248 aaKnown RBP8.71□□□□□ -1.02
SSBP3-212ENST00000528930 C1QL3Q5VWW1 255 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 TRNP1Q6NT89 227 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 IGF2-ASQ6U949 168 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 ADIPOR2Q86V24 386 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 FIBINQ8TAL6 211 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 ZNF564Q8TBZ8 553 aaPredicted RBP8.71□□□□□ -1.02
SSBP3-212ENST00000528930 CPA5Q8WXQ8 436 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 SORCS1Q8WY21 1168 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 EXTL1Q92935 676 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 IGSF8Q969P0 613 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 VCPIP1Q96JH7 1222 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 BTN2A3PQ96KV6 586 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 PCMTD1Q96MG8 357 aaPredicted RBP8.71□□□□□ -1.02
SSBP3-212ENST00000528930 SPAG5Q96R06 1193 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 PRMT1Q99873 361 aaKnown RBP8.71□□□□□ -1.02
SSBP3-212ENST00000528930 DDX50Q9BQ39 737 aaKnown RBP8.71□□□□□ -1.02
SSBP3-212ENST00000528930 SLC25A18Q9H1K4 315 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 SYNCQ9H7C4 482 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 FAM204AQ9H8W3 233 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 DDIT4Q9NX09 232 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 TMEM59LQ9UK28 342 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 RAD54BQ9Y620 910 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 STON1Q9Y6Q2 735 aa8.71□□□□□ -1.02
SSBP3-212ENST00000528930 APCP25054 2843 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 CKAP5Q14008 2032 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 SYNJ2BP-COX16A0A087WUM0 186 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 A0A1B0GTH6 734 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 MEI4A8MW99 385 aa8.7□□□□□ -1.02
SSBP3-212ENST00000528930 I6L893 689 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms