RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 SPG21Q9NZD8 308 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 HCSTQ9UBK5 93 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 PLIN3O60664 434 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 PRAMEF11O60813 436 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 CLDN11O75508 207 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 CNTN5O94779 1100 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 UBOX5O94941 541 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 HMBSP08397 361 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 BGNP21810 368 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 GRK2P25098 689 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 NMBRP28336 390 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 ELF1P32519 619 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 PPM1AP35813 382 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 ETFBP38117 255 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 ARFIP2P53365 341 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 PRKAA2P54646 552 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 TMPRSS15P98073 1019 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 STX3Q13277 289 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 PLD1Q13393 1074 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 RFTN1Q14699 578 aaPredicted RBP14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 LBRQ14739 615 aaKnown RBP14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 FSTL4Q6MZW2 842 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 CHST9Q7L1S5 443 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 TFAP2DQ7Z6R9 452 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 CRLF3Q8IUI8 442 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 HERC6Q8IVU3 1022 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 LGI2Q8N0V4 545 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 DCLK2Q8N568 766 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 ZNF784Q8NCA9 323 aaPredicted RBP14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 TADA1Q96BN2 335 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 APOL2Q9BQE5 337 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 NT5MQ9NPB1 228 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 SAR1AQ9NR31 198 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 IARS2Q9NSE4 1012 aaKnown RBP14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 PSAT1Q9Y617 370 aa14.98□□□□□ -0.01
ECHDC1-220ENST00000528402 LTBP2Q14767 1821 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 ADAM12O43184 909 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 DNAJC6O75061 913 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 H2AFYO75367 372 aaKnown RBP14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 PMPCBO75439 489 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 URODP06132 367 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 HMGA1P17096 107 aaKnown RBP14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 SERPINH1P50454 418 aaKnown RBP14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 ITKQ08881 620 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 OLIG2Q13516 323 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 THOC5Q13769 683 aaKnown RBP14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 PABPC1LQ4VXU2 614 aaKnown RBP14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 FAM133BQ5BKY9 247 aaKnown RBP14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 N4BP2L1Q5TBK1 243 aaPredicted RBP14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 NADSYN1Q6IA69 706 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 GALNT7Q86SF2 657 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 SETD3Q86TU7 594 aaPredicted RBP14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 ITIH5Q86UX2 942 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 ZNF354CQ86Y25 554 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 PPP1R14CQ8TAE6 165 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 PTPRN2Q92932 1015 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 PSMG2Q969U7 264 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 PABPC5Q96DU9 382 aaKnown RBP14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 RMDN2Q96LZ7 410 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 TSNARE1Q96NA8 513 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 GPR22Q99680 433 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 VN1R3Q9BXE9 311 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 POLR1EQ9GZS1 481 aaKnown RBP14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 C12orf65Q9H3J6 166 aaKnown RBP14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 CYP4F11Q9HBI6 524 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 NPHS2Q9NP85 383 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 SNX15Q9NRS6 342 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 TREX1Q9NSU2 369 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 KCNK4Q9NYG8 393 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 ATP11BQ9Y2G3 1177 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 CHD5Q8TDI0 1954 aa14.97□□□□□ -0.01
ECHDC1-220ENST00000528402 MIA3Q5JRA6 1907 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 LOC285095A0A1B0GVY8 99 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 ILVBLA1L0T0 632 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 J3KR12 359 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 SNNO75324 88 aaPredicted RBP14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 BAIAP3O94812 1187 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 TIMP1P01033 207 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 MYCP01106 439 aaPredicted RBP14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 EPHB3P54753 998 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 OCRLQ01968 901 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 SLC10A7Q0GE19 358 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 CHI3L2Q15782 390 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 TTC31Q49AM3 519 aaPredicted RBP14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 FASTKD1Q53R41 847 aaKnown RBP14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 ZNF783Q6ZMS7 281 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 TCEAL8Q8IYN2 117 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 RDH11Q8TC12 318 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 VPS39Q96JC1 886 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 STN1Q9H668 368 aaKnown RBP14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 ECT2Q9H8V3 914 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 RC3H2Q9HBD1 1191 aaKnown RBP14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 ALG13Q9NP73 1137 aaKnown RBP14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 TLK1Q9UKI8 766 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 RIMKLBQ9ULI2 386 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 ASB3Q9Y575 518 aa14.96□□□□□ -0.01
ECHDC1-220ENST00000528402 A0A096LPK6 155 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 COCHO43405 550 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 UNC5CO95185 931 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 SEC24AO95486 1093 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms